Gene : Seita.2G196900 S. italica v2.2
Defline:  (1 of 2) PTHR10502//PTHR10502:SF120 - ANNEXIN Genomic Order:  1969
Name:  ? Seita.2G196900 Secondary Identifier:  ? PAC:32719386
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G196900 0.5kb upstream 0.5kb upstream 4850 true scaffold_2: 29383584-29388433 Setaria italica
Seita.2G196900 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 29383584-29384083 Setaria italica
Seita.2G196900 0.5kb downstream 0.5kb downstream 4850 true scaffold_2: 29384084-29388933 Setaria italica
Seita.2G196900 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 29388434-29388933 Setaria italica
Seita.2G196900 1.0kb upstream 1.0kb upstream 5350 true scaffold_2: 29383084-29388433 Setaria italica
Seita.2G196900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 29383084-29384083 Setaria italica
Seita.2G196900 1.0kb downstream 1.0kb downstream 5350 true scaffold_2: 29384084-29389433 Setaria italica
Seita.2G196900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 29388434-29389433 Setaria italica
Seita.2G196900 2.0kb upstream 2.0kb upstream 6350 true scaffold_2: 29382084-29388433 Setaria italica
Seita.2G196900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 29382084-29384083 Setaria italica
Seita.2G196900 2.0kb downstream 2.0kb downstream 6350 true scaffold_2: 29384084-29390433 Setaria italica
Seita.2G196900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 29388434-29390433 Setaria italica
Seita.2G196900 5.0kb upstream 5.0kb upstream 9350 true scaffold_2: 29379084-29388433 Setaria italica
Seita.2G196900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 29379084-29384083 Setaria italica
Seita.2G196900 5.0kb downstream 5.0kb downstream 9350 true scaffold_2: 29384084-29393433 Setaria italica
Seita.2G196900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 29388434-29393433 Setaria italica
Seita.2G196900 10.0kb upstream 10.0kb upstream 14350 true scaffold_2: 29374084-29388433 Setaria italica
Seita.2G196900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 29374084-29384083 Setaria italica
Seita.2G196900 10.0kb downstream 10.0kb downstream 14350 true scaffold_2: 29384084-29398433 Setaria italica
Seita.2G196900 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 29388434-29398433 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194149 5267 Panicoideae View MSA
124573316 5269 Grass View MSA
122043573 5273 Angiosperm View MSA
121348021 5274 Embryophyte View MSA
123380707 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.922     High  
cufflinks 25.022     High  
cufflinks 24.923     High  
cufflinks 22.91     High  
cufflinks 22.583     High  
cufflinks 27.778     High  
cufflinks 20.763     High  
cufflinks 23.452     High  
cufflinks 15.921     High Low
cufflinks 22.682     High  
cufflinks 21.004     High  
cufflinks 40.585     High High
cufflinks 35.639     High High
cufflinks 22.592     High  
cufflinks 32.932     High High
cufflinks 23.686     High  
cufflinks 34.813     High High
cufflinks 29.906     High  
cufflinks 24.893     High  
cufflinks 30.266     High  

0 Strain