Gene : Seita.2G201200 S. italica v2.2
Defline:  (1 of 2) PF10263 - SprT-like family (SprT-like) Genomic Order:  2012
Name:  ? Seita.2G201200 Secondary Identifier:  ? PAC:32720254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G201200 0.5kb upstream 0.5kb upstream 7159 true scaffold_2: 30089916-30097074 Setaria italica
Seita.2G201200 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 30096575-30097074 Setaria italica
Seita.2G201200 0.5kb downstream 0.5kb downstream 7159 true scaffold_2: 30089416-30096574 Setaria italica
Seita.2G201200 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 30089416-30089915 Setaria italica
Seita.2G201200 1.0kb upstream 1.0kb upstream 7659 true scaffold_2: 30089916-30097574 Setaria italica
Seita.2G201200 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 30096575-30097574 Setaria italica
Seita.2G201200 1.0kb downstream 1.0kb downstream 7659 true scaffold_2: 30088916-30096574 Setaria italica
Seita.2G201200 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 30088916-30089915 Setaria italica
Seita.2G201200 2.0kb upstream 2.0kb upstream 8659 true scaffold_2: 30089916-30098574 Setaria italica
Seita.2G201200 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 30096575-30098574 Setaria italica
Seita.2G201200 2.0kb downstream 2.0kb downstream 8659 true scaffold_2: 30087916-30096574 Setaria italica
Seita.2G201200 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 30087916-30089915 Setaria italica
Seita.2G201200 5.0kb upstream 5.0kb upstream 11659 true scaffold_2: 30089916-30101574 Setaria italica
Seita.2G201200 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 30096575-30101574 Setaria italica
Seita.2G201200 5.0kb downstream 5.0kb downstream 11659 true scaffold_2: 30084916-30096574 Setaria italica
Seita.2G201200 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 30084916-30089915 Setaria italica
Seita.2G201200 10.0kb upstream 10.0kb upstream 16659 true scaffold_2: 30089916-30106574 Setaria italica
Seita.2G201200 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 30096575-30106574 Setaria italica
Seita.2G201200 10.0kb downstream 10.0kb downstream 16659 true scaffold_2: 30079916-30096574 Setaria italica
Seita.2G201200 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 30079916-30089915 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122005800 5273 Angiosperm View MSA
122194601 5267 Panicoideae View MSA
124579452 5269 Grass View MSA
121275938 5274 Embryophyte View MSA
123426815 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.595        
cufflinks 2.774       High
cufflinks 0.088        
cufflinks 0.05     Low Low
cufflinks 0.092        
cufflinks 3.612       High
cufflinks 0.395        
cufflinks 0.286        
cufflinks 0.212        
cufflinks 0.395        
cufflinks 0.28        
cufflinks 0.231        
cufflinks 0.386        
cufflinks 0.054     Low Low
cufflinks 0.182        
cufflinks 0.22        
cufflinks 0.288        
cufflinks 0.249        
cufflinks 0.05     Low Low
cufflinks 0.219        

0 Strain