Gene : Seita.2G207800 S. italica v2.2
Defline:  (1 of 1) PTHR24115:SF535 - KINESIN-RELATED PROTEIN 4 Genomic Order:  2078
Name:  ? Seita.2G207800 Secondary Identifier:  ? PAC:32721538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G207800 0.5kb upstream 0.5kb upstream 12978 true scaffold_2: 30965387-30978364 Setaria italica
Seita.2G207800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 30977865-30978364 Setaria italica
Seita.2G207800 0.5kb downstream 0.5kb downstream 12978 true scaffold_2: 30964887-30977864 Setaria italica
Seita.2G207800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 30964887-30965386 Setaria italica
Seita.2G207800 1.0kb upstream 1.0kb upstream 13478 true scaffold_2: 30965387-30978864 Setaria italica
Seita.2G207800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 30977865-30978864 Setaria italica
Seita.2G207800 1.0kb downstream 1.0kb downstream 13478 true scaffold_2: 30964387-30977864 Setaria italica
Seita.2G207800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 30964387-30965386 Setaria italica
Seita.2G207800 2.0kb upstream 2.0kb upstream 14478 true scaffold_2: 30965387-30979864 Setaria italica
Seita.2G207800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 30977865-30979864 Setaria italica
Seita.2G207800 2.0kb downstream 2.0kb downstream 14478 true scaffold_2: 30963387-30977864 Setaria italica
Seita.2G207800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 30963387-30965386 Setaria italica
Seita.2G207800 5.0kb upstream 5.0kb upstream 17478 true scaffold_2: 30965387-30982864 Setaria italica
Seita.2G207800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 30977865-30982864 Setaria italica
Seita.2G207800 5.0kb downstream 5.0kb downstream 17478 true scaffold_2: 30960387-30977864 Setaria italica
Seita.2G207800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 30960387-30965386 Setaria italica
Seita.2G207800 10.0kb upstream 10.0kb upstream 22478 true scaffold_2: 30965387-30987864 Setaria italica
Seita.2G207800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 30977865-30987864 Setaria italica
Seita.2G207800 10.0kb downstream 10.0kb downstream 22478 true scaffold_2: 30955387-30977864 Setaria italica
Seita.2G207800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 30955387-30965386 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183740 5267 Panicoideae View MSA
124581399 5269 Grass View MSA
122043675 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121348055 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.217        
cufflinks 0.311        
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.305        
cufflinks 0.22        
cufflinks 0.408        
cufflinks 0.193        
cufflinks 0.078     Low  
cufflinks 0.298        
cufflinks 0.152        
cufflinks 0.103     Low  
cufflinks 0.003     Low Low
cufflinks 0.214        
cufflinks 0.04     Low  
cufflinks 0.176        
cufflinks 0.016     Low  
cufflinks 0.001     Low Low
cufflinks 0.213        

0 Strain