Gene : Seita.2G212600 S. italica v2.2
Defline:  (1 of 4) PTHR18966//PTHR18966:SF223 - IONOTROPIC GLUTAMATE RECEPTOR Genomic Order:  2126
Name:  ? Seita.2G212600 Secondary Identifier:  ? PAC:32720518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G212600 0.5kb upstream 0.5kb upstream 7524 true scaffold_2: 31372165-31379688 Setaria italica
Seita.2G212600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 31379189-31379688 Setaria italica
Seita.2G212600 0.5kb downstream 0.5kb downstream 7524 true scaffold_2: 31371665-31379188 Setaria italica
Seita.2G212600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 31371665-31372164 Setaria italica
Seita.2G212600 1.0kb upstream 1.0kb upstream 8024 true scaffold_2: 31372165-31380188 Setaria italica
Seita.2G212600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 31379189-31380188 Setaria italica
Seita.2G212600 1.0kb downstream 1.0kb downstream 8024 true scaffold_2: 31371165-31379188 Setaria italica
Seita.2G212600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 31371165-31372164 Setaria italica
Seita.2G212600 2.0kb upstream 2.0kb upstream 9024 true scaffold_2: 31372165-31381188 Setaria italica
Seita.2G212600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 31379189-31381188 Setaria italica
Seita.2G212600 2.0kb downstream 2.0kb downstream 9024 true scaffold_2: 31370165-31379188 Setaria italica
Seita.2G212600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 31370165-31372164 Setaria italica
Seita.2G212600 5.0kb upstream 5.0kb upstream 12024 true scaffold_2: 31372165-31384188 Setaria italica
Seita.2G212600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 31379189-31384188 Setaria italica
Seita.2G212600 5.0kb downstream 5.0kb downstream 12024 true scaffold_2: 31367165-31379188 Setaria italica
Seita.2G212600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 31367165-31372164 Setaria italica
Seita.2G212600 10.0kb upstream 10.0kb upstream 17024 true scaffold_2: 31372165-31389188 Setaria italica
Seita.2G212600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 31379189-31389188 Setaria italica
Seita.2G212600 10.0kb downstream 10.0kb downstream 17024 true scaffold_2: 31362165-31379188 Setaria italica
Seita.2G212600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 31362165-31372164 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199840 5267 Panicoideae View MSA
124589593 5269 Grass View MSA
122051662 5273 Angiosperm View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.1     Low High
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  

0 Strain