Gene : Seita.2G212800 S. italica v2.2
Defline:  (1 of 2) PTHR18966//PTHR18966:SF182 - IONOTROPIC GLUTAMATE RECEPTOR Genomic Order:  2128
Name:  ? Seita.2G212800 Secondary Identifier:  ? PAC:32721895
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G212800 0.5kb upstream 0.5kb upstream 4293 true scaffold_2: 31405571-31409863 Setaria italica
Seita.2G212800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 31409364-31409863 Setaria italica
Seita.2G212800 0.5kb downstream 0.5kb downstream 4293 true scaffold_2: 31405071-31409363 Setaria italica
Seita.2G212800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 31405071-31405570 Setaria italica
Seita.2G212800 1.0kb upstream 1.0kb upstream 4793 true scaffold_2: 31405571-31410363 Setaria italica
Seita.2G212800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 31409364-31410363 Setaria italica
Seita.2G212800 1.0kb downstream 1.0kb downstream 4793 true scaffold_2: 31404571-31409363 Setaria italica
Seita.2G212800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 31404571-31405570 Setaria italica
Seita.2G212800 2.0kb upstream 2.0kb upstream 5793 true scaffold_2: 31405571-31411363 Setaria italica
Seita.2G212800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 31409364-31411363 Setaria italica
Seita.2G212800 2.0kb downstream 2.0kb downstream 5793 true scaffold_2: 31403571-31409363 Setaria italica
Seita.2G212800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 31403571-31405570 Setaria italica
Seita.2G212800 5.0kb upstream 5.0kb upstream 8793 true scaffold_2: 31405571-31414363 Setaria italica
Seita.2G212800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 31409364-31414363 Setaria italica
Seita.2G212800 5.0kb downstream 5.0kb downstream 8793 true scaffold_2: 31400571-31409363 Setaria italica
Seita.2G212800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 31400571-31405570 Setaria italica
Seita.2G212800 10.0kb upstream 10.0kb upstream 13793 true scaffold_2: 31405571-31419363 Setaria italica
Seita.2G212800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 31409364-31419363 Setaria italica
Seita.2G212800 10.0kb downstream 10.0kb downstream 13793 true scaffold_2: 31395571-31409363 Setaria italica
Seita.2G212800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 31395571-31405570 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199840 5267 Panicoideae View MSA
124589593 5269 Grass View MSA
122051662 5273 Angiosperm View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.004     Low Low
cufflinks 0.172     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.834       High
cufflinks 0.249        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.801       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.113       High
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.224       High

0 Strain