Gene : Seita.2G226400 S. italica v2.2
Defline:  (1 of 1) PTHR11214//PTHR11214:SF102 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE Genomic Order:  2264
Name:  ? Seita.2G226400 Secondary Identifier:  ? PAC:32721903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G226400 0.5kb upstream 0.5kb upstream 4316 true scaffold_2: 32864143-32868458 Setaria italica
Seita.2G226400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 32867959-32868458 Setaria italica
Seita.2G226400 0.5kb downstream 0.5kb downstream 4316 true scaffold_2: 32863643-32867958 Setaria italica
Seita.2G226400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 32863643-32864142 Setaria italica
Seita.2G226400 1.0kb upstream 1.0kb upstream 4816 true scaffold_2: 32864143-32868958 Setaria italica
Seita.2G226400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 32867959-32868958 Setaria italica
Seita.2G226400 1.0kb downstream 1.0kb downstream 4816 true scaffold_2: 32863143-32867958 Setaria italica
Seita.2G226400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 32863143-32864142 Setaria italica
Seita.2G226400 2.0kb upstream 2.0kb upstream 5816 true scaffold_2: 32864143-32869958 Setaria italica
Seita.2G226400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 32867959-32869958 Setaria italica
Seita.2G226400 2.0kb downstream 2.0kb downstream 5816 true scaffold_2: 32862143-32867958 Setaria italica
Seita.2G226400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 32862143-32864142 Setaria italica
Seita.2G226400 5.0kb upstream 5.0kb upstream 8816 true scaffold_2: 32864143-32872958 Setaria italica
Seita.2G226400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 32867959-32872958 Setaria italica
Seita.2G226400 5.0kb downstream 5.0kb downstream 8816 true scaffold_2: 32859143-32867958 Setaria italica
Seita.2G226400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 32859143-32864142 Setaria italica
Seita.2G226400 10.0kb upstream 10.0kb upstream 13816 true scaffold_2: 32864143-32877958 Setaria italica
Seita.2G226400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 32867959-32877958 Setaria italica
Seita.2G226400 10.0kb downstream 10.0kb downstream 13816 true scaffold_2: 32854143-32867958 Setaria italica
Seita.2G226400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 32854143-32864142 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181652 5267 Panicoideae View MSA
124569647 5269 Grass View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.302       Low
cufflinks 0.83        
cufflinks 0.6        
cufflinks 1.012        
cufflinks 0.832        
cufflinks 1.24        
cufflinks 1.651        
cufflinks 0.806        
cufflinks 0.737        
cufflinks 0.296     Low Low
cufflinks 0.108     Low Low
cufflinks 1.617        
cufflinks 0.566        
cufflinks 6.858       High
cufflinks 1.408        
cufflinks 1.382        
cufflinks 1.592        
cufflinks 7.224       High
cufflinks 8.78       High
cufflinks 1.115        

0 Strain