Gene : Seita.2G163500 S. italica v2.2
Defline:  (1 of 1) PTHR10871:SF4 - DNA TOPOISOMERASE 6 SUBUNIT B Genomic Order:  1635
Name:  ? Seita.2G163500 Secondary Identifier:  ? PAC:32720436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G163500 0.5kb upstream 0.5kb upstream 6620 true scaffold_2: 24103417-24110036 Setaria italica
Seita.2G163500 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 24109537-24110036 Setaria italica
Seita.2G163500 0.5kb downstream 0.5kb downstream 6620 true scaffold_2: 24102917-24109536 Setaria italica
Seita.2G163500 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 24102917-24103416 Setaria italica
Seita.2G163500 1.0kb upstream 1.0kb upstream 7120 true scaffold_2: 24103417-24110536 Setaria italica
Seita.2G163500 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 24109537-24110536 Setaria italica
Seita.2G163500 1.0kb downstream 1.0kb downstream 7120 true scaffold_2: 24102417-24109536 Setaria italica
Seita.2G163500 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 24102417-24103416 Setaria italica
Seita.2G163500 2.0kb upstream 2.0kb upstream 8120 true scaffold_2: 24103417-24111536 Setaria italica
Seita.2G163500 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 24109537-24111536 Setaria italica
Seita.2G163500 2.0kb downstream 2.0kb downstream 8120 true scaffold_2: 24101417-24109536 Setaria italica
Seita.2G163500 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 24101417-24103416 Setaria italica
Seita.2G163500 5.0kb upstream 5.0kb upstream 11120 true scaffold_2: 24103417-24114536 Setaria italica
Seita.2G163500 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 24109537-24114536 Setaria italica
Seita.2G163500 5.0kb downstream 5.0kb downstream 11120 true scaffold_2: 24098417-24109536 Setaria italica
Seita.2G163500 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 24098417-24103416 Setaria italica
Seita.2G163500 10.0kb upstream 10.0kb upstream 16120 true scaffold_2: 24103417-24119536 Setaria italica
Seita.2G163500 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 24109537-24119536 Setaria italica
Seita.2G163500 10.0kb downstream 10.0kb downstream 16120 true scaffold_2: 24093417-24109536 Setaria italica
Seita.2G163500 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 24093417-24103416 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186586 5267 Panicoideae View MSA
124575503 5269 Grass View MSA
122045441 5273 Angiosperm View MSA
121347083 5274 Embryophyte View MSA
123424987 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.727        
cufflinks 8.728       High
cufflinks 3.775        
cufflinks 3.728        
cufflinks 3.669        
cufflinks 9.677       High
cufflinks 5.303        
cufflinks 5.76        
cufflinks 5.46        
cufflinks 2.798       Low
cufflinks 5.055        
cufflinks 5.536        
cufflinks 4.845        
cufflinks 3.33       Low
cufflinks 5.265        
cufflinks 4.457        
cufflinks 5.88        
cufflinks 4.008        
cufflinks 2.573       Low
cufflinks 6.301        

0 Strain