Gene : Seita.2G163400 S. italica v2.2
Defline:  (1 of 1) PTHR22604:SF111 - NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN Genomic Order:  1634
Name:  ? Seita.2G163400 Secondary Identifier:  ? PAC:32722114
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G163400 0.5kb upstream 0.5kb upstream 5088 true scaffold_2: 24097625-24102712 Setaria italica
Seita.2G163400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 24102213-24102712 Setaria italica
Seita.2G163400 0.5kb downstream 0.5kb downstream 5088 true scaffold_2: 24097125-24102212 Setaria italica
Seita.2G163400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 24097125-24097624 Setaria italica
Seita.2G163400 1.0kb upstream 1.0kb upstream 5588 true scaffold_2: 24097625-24103212 Setaria italica
Seita.2G163400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 24102213-24103212 Setaria italica
Seita.2G163400 1.0kb downstream 1.0kb downstream 5588 true scaffold_2: 24096625-24102212 Setaria italica
Seita.2G163400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 24096625-24097624 Setaria italica
Seita.2G163400 2.0kb upstream 2.0kb upstream 6588 true scaffold_2: 24097625-24104212 Setaria italica
Seita.2G163400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 24102213-24104212 Setaria italica
Seita.2G163400 2.0kb downstream 2.0kb downstream 6588 true scaffold_2: 24095625-24102212 Setaria italica
Seita.2G163400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 24095625-24097624 Setaria italica
Seita.2G163400 5.0kb upstream 5.0kb upstream 9588 true scaffold_2: 24097625-24107212 Setaria italica
Seita.2G163400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 24102213-24107212 Setaria italica
Seita.2G163400 5.0kb downstream 5.0kb downstream 9588 true scaffold_2: 24092625-24102212 Setaria italica
Seita.2G163400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 24092625-24097624 Setaria italica
Seita.2G163400 10.0kb upstream 10.0kb upstream 14588 true scaffold_2: 24097625-24112212 Setaria italica
Seita.2G163400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 24102213-24112212 Setaria italica
Seita.2G163400 10.0kb downstream 10.0kb downstream 14588 true scaffold_2: 24087625-24102212 Setaria italica
Seita.2G163400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 24087625-24097624 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186063 5267 Panicoideae View MSA
124577667 5269 Grass View MSA
122041944 5273 Angiosperm View MSA
121346976 5274 Embryophyte View MSA
123425527 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.832        
cufflinks 8.751        
cufflinks 8.974        
cufflinks 7.502        
cufflinks 2.95       Low
cufflinks 8.379        
cufflinks 4.866        
cufflinks 9.827        
cufflinks 5.042        
cufflinks 10.273        
cufflinks 7.746        
cufflinks 7.836        
cufflinks 7.848        
cufflinks 4.651        
cufflinks 12.287       High
cufflinks 2.315       Low
cufflinks 11.443       High
cufflinks 1.922       Low
cufflinks 4.792        
cufflinks 13.273       High

0 Strain