Gene : Seita.2G164700 S. italica v2.2
Defline:  (1 of 1) PTHR23029:SF49 - PHOSPHOHISTIDINE PHOSPHATASE SIXA Genomic Order:  1647
Name:  ? Seita.2G164700 Secondary Identifier:  ? PAC:32719470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G164700 0.5kb upstream 0.5kb upstream 3295 true scaffold_2: 24316085-24319379 Setaria italica
Seita.2G164700 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 24318880-24319379 Setaria italica
Seita.2G164700 0.5kb downstream 0.5kb downstream 3295 true scaffold_2: 24315585-24318879 Setaria italica
Seita.2G164700 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 24315585-24316084 Setaria italica
Seita.2G164700 1.0kb upstream 1.0kb upstream 3795 true scaffold_2: 24316085-24319879 Setaria italica
Seita.2G164700 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 24318880-24319879 Setaria italica
Seita.2G164700 1.0kb downstream 1.0kb downstream 3795 true scaffold_2: 24315085-24318879 Setaria italica
Seita.2G164700 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 24315085-24316084 Setaria italica
Seita.2G164700 2.0kb upstream 2.0kb upstream 4795 true scaffold_2: 24316085-24320879 Setaria italica
Seita.2G164700 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 24318880-24320879 Setaria italica
Seita.2G164700 2.0kb downstream 2.0kb downstream 4795 true scaffold_2: 24314085-24318879 Setaria italica
Seita.2G164700 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 24314085-24316084 Setaria italica
Seita.2G164700 5.0kb upstream 5.0kb upstream 7795 true scaffold_2: 24316085-24323879 Setaria italica
Seita.2G164700 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 24318880-24323879 Setaria italica
Seita.2G164700 5.0kb downstream 5.0kb downstream 7795 true scaffold_2: 24311085-24318879 Setaria italica
Seita.2G164700 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 24311085-24316084 Setaria italica
Seita.2G164700 10.0kb upstream 10.0kb upstream 12795 true scaffold_2: 24316085-24328879 Setaria italica
Seita.2G164700 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 24318880-24328879 Setaria italica
Seita.2G164700 10.0kb downstream 10.0kb downstream 12795 true scaffold_2: 24306085-24318879 Setaria italica
Seita.2G164700 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 24306085-24316084 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178972 5267 Panicoideae View MSA
124582314 5269 Grass View MSA
122043968 5273 Angiosperm View MSA
121345755 5274 Embryophyte View MSA
123426620 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.185        
cufflinks 1.013        
cufflinks 2.291        
cufflinks 1.906        
cufflinks 2.253        
cufflinks 1.139        
cufflinks 2.203        
cufflinks 3.747       High
cufflinks 3.883       High
cufflinks 1.426        
cufflinks 0.879        
cufflinks 1.006        
cufflinks 0.704       Low
cufflinks 2.072        
cufflinks 0.649       Low
cufflinks 1.798        
cufflinks 0.857        
cufflinks 1.664        
cufflinks 1.863        
cufflinks 0.657       Low

0 Strain