Gene : Seita.2G172600 S. italica v2.2
Genomic Order:  1726 Name:  ? Seita.2G172600
Secondary Identifier:  ? PAC:32721507
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G172600 0.5kb upstream 0.5kb upstream 2674 true scaffold_2: 25910904-25913577 Setaria italica
Seita.2G172600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 25913078-25913577 Setaria italica
Seita.2G172600 0.5kb downstream 0.5kb downstream 2674 true scaffold_2: 25910404-25913077 Setaria italica
Seita.2G172600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 25910404-25910903 Setaria italica
Seita.2G172600 1.0kb upstream 1.0kb upstream 3174 true scaffold_2: 25910904-25914077 Setaria italica
Seita.2G172600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 25913078-25914077 Setaria italica
Seita.2G172600 1.0kb downstream 1.0kb downstream 3174 true scaffold_2: 25909904-25913077 Setaria italica
Seita.2G172600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 25909904-25910903 Setaria italica
Seita.2G172600 2.0kb upstream 2.0kb upstream 4174 true scaffold_2: 25910904-25915077 Setaria italica
Seita.2G172600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 25913078-25915077 Setaria italica
Seita.2G172600 2.0kb downstream 2.0kb downstream 4174 true scaffold_2: 25908904-25913077 Setaria italica
Seita.2G172600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 25908904-25910903 Setaria italica
Seita.2G172600 5.0kb upstream 5.0kb upstream 7174 true scaffold_2: 25910904-25918077 Setaria italica
Seita.2G172600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 25913078-25918077 Setaria italica
Seita.2G172600 5.0kb downstream 5.0kb downstream 7174 true scaffold_2: 25905904-25913077 Setaria italica
Seita.2G172600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 25905904-25910903 Setaria italica
Seita.2G172600 10.0kb upstream 10.0kb upstream 12174 true scaffold_2: 25910904-25923077 Setaria italica
Seita.2G172600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 25913078-25923077 Setaria italica
Seita.2G172600 10.0kb downstream 10.0kb downstream 12174 true scaffold_2: 25900904-25913077 Setaria italica
Seita.2G172600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 25900904-25910903 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996241 5273 Angiosperm View MSA
122052947 5267 Panicoideae Singleton cluster - no MSA
124591012 5269 Grass View MSA
121266409 5274 Embryophyte View MSA
123304751 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain