Gene : Seita.2G185500 S. italica v2.2
Defline:  (1 of 2) PTHR21329 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT Q-RELATED Genomic Order:  1855
Name:  ? Seita.2G185500 Secondary Identifier:  ? PAC:32721840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G185500 0.5kb upstream 0.5kb upstream 4332 true scaffold_2: 28101576-28105907 Setaria italica
Seita.2G185500 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 28105408-28105907 Setaria italica
Seita.2G185500 0.5kb downstream 0.5kb downstream 4332 true scaffold_2: 28101076-28105407 Setaria italica
Seita.2G185500 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 28101076-28101575 Setaria italica
Seita.2G185500 1.0kb upstream 1.0kb upstream 4832 true scaffold_2: 28101576-28106407 Setaria italica
Seita.2G185500 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 28105408-28106407 Setaria italica
Seita.2G185500 1.0kb downstream 1.0kb downstream 4832 true scaffold_2: 28100576-28105407 Setaria italica
Seita.2G185500 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 28100576-28101575 Setaria italica
Seita.2G185500 2.0kb upstream 2.0kb upstream 5832 true scaffold_2: 28101576-28107407 Setaria italica
Seita.2G185500 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 28105408-28107407 Setaria italica
Seita.2G185500 2.0kb downstream 2.0kb downstream 5832 true scaffold_2: 28099576-28105407 Setaria italica
Seita.2G185500 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 28099576-28101575 Setaria italica
Seita.2G185500 5.0kb upstream 5.0kb upstream 8832 true scaffold_2: 28101576-28110407 Setaria italica
Seita.2G185500 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 28105408-28110407 Setaria italica
Seita.2G185500 5.0kb downstream 5.0kb downstream 8832 true scaffold_2: 28096576-28105407 Setaria italica
Seita.2G185500 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 28096576-28101575 Setaria italica
Seita.2G185500 10.0kb upstream 10.0kb upstream 13832 true scaffold_2: 28101576-28115407 Setaria italica
Seita.2G185500 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 28105408-28115407 Setaria italica
Seita.2G185500 10.0kb downstream 10.0kb downstream 13832 true scaffold_2: 28091576-28105407 Setaria italica
Seita.2G185500 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 28091576-28101575 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186209 5267 Panicoideae View MSA
124586126 5269 Grass View MSA
122043759 5273 Angiosperm View MSA
121347036 5274 Embryophyte View MSA
123380483 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.953        
cufflinks 2.067        
cufflinks 2.021        
cufflinks 3.153        
cufflinks 2.015        
cufflinks 1.665        
cufflinks 1.352        
cufflinks 1.542        
cufflinks 1.022       Low
cufflinks 6.71       High
cufflinks 1.635        
cufflinks 2.605        
cufflinks 1.989        
cufflinks 1.865        
cufflinks 2.456        
cufflinks 1.235        
cufflinks 2.134        
cufflinks 11.945     High High
cufflinks 1.604        
cufflinks 1.486        

0 Strain