Gene : Seita.2G184300 S. italica v2.2
Defline:  (1 of 2) PTHR33057:SF29 - F18B13.4 PROTEIN Genomic Order:  1843
Name:  ? Seita.2G184300 Secondary Identifier:  ? PAC:32721719
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G184300 0.5kb upstream 0.5kb upstream 1894 true scaffold_2: 27983190-27985083 Setaria italica
Seita.2G184300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 27983190-27983689 Setaria italica
Seita.2G184300 0.5kb downstream 0.5kb downstream 1894 true scaffold_2: 27983690-27985583 Setaria italica
Seita.2G184300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 27985084-27985583 Setaria italica
Seita.2G184300 1.0kb upstream 1.0kb upstream 2394 true scaffold_2: 27982690-27985083 Setaria italica
Seita.2G184300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 27982690-27983689 Setaria italica
Seita.2G184300 1.0kb downstream 1.0kb downstream 2394 true scaffold_2: 27983690-27986083 Setaria italica
Seita.2G184300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 27985084-27986083 Setaria italica
Seita.2G184300 2.0kb upstream 2.0kb upstream 3394 true scaffold_2: 27981690-27985083 Setaria italica
Seita.2G184300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 27981690-27983689 Setaria italica
Seita.2G184300 2.0kb downstream 2.0kb downstream 3394 true scaffold_2: 27983690-27987083 Setaria italica
Seita.2G184300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 27985084-27987083 Setaria italica
Seita.2G184300 5.0kb upstream 5.0kb upstream 6394 true scaffold_2: 27978690-27985083 Setaria italica
Seita.2G184300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 27978690-27983689 Setaria italica
Seita.2G184300 5.0kb downstream 5.0kb downstream 6394 true scaffold_2: 27983690-27990083 Setaria italica
Seita.2G184300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 27985084-27990083 Setaria italica
Seita.2G184300 10.0kb upstream 10.0kb upstream 11394 true scaffold_2: 27973690-27985083 Setaria italica
Seita.2G184300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 27973690-27983689 Setaria italica
Seita.2G184300 10.0kb downstream 10.0kb downstream 11394 true scaffold_2: 27983690-27995083 Setaria italica
Seita.2G184300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 27985084-27995083 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180452 5267 Panicoideae View MSA
124582286 5269 Grass View MSA
122050605 5273 Angiosperm View MSA
121312020 5274 Embryophyte View MSA
123349235 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low  
cufflinks 0.173       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.257       High
cufflinks 0.049     Low  
cufflinks 0.009     Low Low
cufflinks 0.059     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain