Gene : Seita.2G191300 S. italica v2.2
Defline:  (1 of 2) PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Genomic Order:  1913
Name:  ? Seita.2G191300 Secondary Identifier:  ? PAC:32721017
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G191300 0.5kb upstream 0.5kb upstream 2248 true scaffold_2: 28733825-28736072 Setaria italica
Seita.2G191300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 28733825-28734324 Setaria italica
Seita.2G191300 0.5kb downstream 0.5kb downstream 2248 true scaffold_2: 28734325-28736572 Setaria italica
Seita.2G191300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 28736073-28736572 Setaria italica
Seita.2G191300 1.0kb upstream 1.0kb upstream 2748 true scaffold_2: 28733325-28736072 Setaria italica
Seita.2G191300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 28733325-28734324 Setaria italica
Seita.2G191300 1.0kb downstream 1.0kb downstream 2748 true scaffold_2: 28734325-28737072 Setaria italica
Seita.2G191300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 28736073-28737072 Setaria italica
Seita.2G191300 2.0kb upstream 2.0kb upstream 3748 true scaffold_2: 28732325-28736072 Setaria italica
Seita.2G191300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 28732325-28734324 Setaria italica
Seita.2G191300 2.0kb downstream 2.0kb downstream 3748 true scaffold_2: 28734325-28738072 Setaria italica
Seita.2G191300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 28736073-28738072 Setaria italica
Seita.2G191300 5.0kb upstream 5.0kb upstream 6748 true scaffold_2: 28729325-28736072 Setaria italica
Seita.2G191300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 28729325-28734324 Setaria italica
Seita.2G191300 5.0kb downstream 5.0kb downstream 6748 true scaffold_2: 28734325-28741072 Setaria italica
Seita.2G191300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 28736073-28741072 Setaria italica
Seita.2G191300 10.0kb upstream 10.0kb upstream 11748 true scaffold_2: 28724325-28736072 Setaria italica
Seita.2G191300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 28724325-28734324 Setaria italica
Seita.2G191300 10.0kb downstream 10.0kb downstream 11748 true scaffold_2: 28734325-28746072 Setaria italica
Seita.2G191300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 28736073-28746072 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187012 5267 Panicoideae View MSA
124575336 5269 Grass View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.25        
cufflinks 0.503        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085        
cufflinks 0.599        
cufflinks 0.055     Low  
cufflinks 0.363        
cufflinks 0.163        
cufflinks 1.519       High
cufflinks 0.375        
cufflinks 0.513        
cufflinks 0.589        
cufflinks 0.031     Low Low
cufflinks 0.579        
cufflinks 0.035     Low Low
cufflinks 0.83        
cufflinks 0.04     Low Low
cufflinks 0.011     Low Low
cufflinks 0.847        

0 Strain