Gene : Seita.2G284100 S. italica v2.2
Defline:  (1 of 2) PF17067 - Ribosomal protein S31e (RPS31) Genomic Order:  2841
Name:  ? Seita.2G284100 Secondary Identifier:  ? PAC:32721328
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G284100 0.5kb upstream 0.5kb upstream 1376 true scaffold_2: 38042640-38044015 Setaria italica
Seita.2G284100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 38043516-38044015 Setaria italica
Seita.2G284100 0.5kb downstream 0.5kb downstream 1376 true scaffold_2: 38042140-38043515 Setaria italica
Seita.2G284100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 38042140-38042639 Setaria italica
Seita.2G284100 1.0kb upstream 1.0kb upstream 1876 true scaffold_2: 38042640-38044515 Setaria italica
Seita.2G284100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 38043516-38044515 Setaria italica
Seita.2G284100 1.0kb downstream 1.0kb downstream 1876 true scaffold_2: 38041640-38043515 Setaria italica
Seita.2G284100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 38041640-38042639 Setaria italica
Seita.2G284100 2.0kb upstream 2.0kb upstream 2876 true scaffold_2: 38042640-38045515 Setaria italica
Seita.2G284100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 38043516-38045515 Setaria italica
Seita.2G284100 2.0kb downstream 2.0kb downstream 2876 true scaffold_2: 38040640-38043515 Setaria italica
Seita.2G284100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 38040640-38042639 Setaria italica
Seita.2G284100 5.0kb upstream 5.0kb upstream 5876 true scaffold_2: 38042640-38048515 Setaria italica
Seita.2G284100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 38043516-38048515 Setaria italica
Seita.2G284100 5.0kb downstream 5.0kb downstream 5876 true scaffold_2: 38037640-38043515 Setaria italica
Seita.2G284100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 38037640-38042639 Setaria italica
Seita.2G284100 10.0kb upstream 10.0kb upstream 10876 true scaffold_2: 38042640-38053515 Setaria italica
Seita.2G284100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 38043516-38053515 Setaria italica
Seita.2G284100 10.0kb downstream 10.0kb downstream 10876 true scaffold_2: 38032640-38043515 Setaria italica
Seita.2G284100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 38032640-38042639 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186432 5267 Panicoideae View MSA
124569985 5269 Grass View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.421        
cufflinks 4.53       Low
cufflinks 3.92       Low
cufflinks 4.698        
cufflinks 4.631       Low
cufflinks 6.367        
cufflinks 5.492        
cufflinks 13.801     High High
cufflinks 5.668        
cufflinks 25.773     High High
cufflinks 6.971        
cufflinks 7.442        
cufflinks 7.207        
cufflinks 7.647        
cufflinks 6.662        
cufflinks 6.666        
cufflinks 11.699       High
cufflinks 6.515        
cufflinks 7.68        
cufflinks 9.81        

0 Strain