Gene : Seita.2G282900 S. italica v2.2
Defline:  (1 of 2) PTHR24073:SF345 - RAS-RELATED PROTEIN RABA3 Genomic Order:  2829
Name:  ? Seita.2G282900 Secondary Identifier:  ? PAC:32723026
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G282900 0.5kb upstream 0.5kb upstream 4516 true scaffold_2: 37935449-37939964 Setaria italica
Seita.2G282900 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 37935449-37935948 Setaria italica
Seita.2G282900 0.5kb downstream 0.5kb downstream 4516 true scaffold_2: 37935949-37940464 Setaria italica
Seita.2G282900 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 37939965-37940464 Setaria italica
Seita.2G282900 1.0kb upstream 1.0kb upstream 5016 true scaffold_2: 37934949-37939964 Setaria italica
Seita.2G282900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 37934949-37935948 Setaria italica
Seita.2G282900 1.0kb downstream 1.0kb downstream 5016 true scaffold_2: 37935949-37940964 Setaria italica
Seita.2G282900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 37939965-37940964 Setaria italica
Seita.2G282900 2.0kb upstream 2.0kb upstream 6016 true scaffold_2: 37933949-37939964 Setaria italica
Seita.2G282900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 37933949-37935948 Setaria italica
Seita.2G282900 2.0kb downstream 2.0kb downstream 6016 true scaffold_2: 37935949-37941964 Setaria italica
Seita.2G282900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 37939965-37941964 Setaria italica
Seita.2G282900 5.0kb upstream 5.0kb upstream 9016 true scaffold_2: 37930949-37939964 Setaria italica
Seita.2G282900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 37930949-37935948 Setaria italica
Seita.2G282900 5.0kb downstream 5.0kb downstream 9016 true scaffold_2: 37935949-37944964 Setaria italica
Seita.2G282900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 37939965-37944964 Setaria italica
Seita.2G282900 10.0kb upstream 10.0kb upstream 14016 true scaffold_2: 37925949-37939964 Setaria italica
Seita.2G282900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 37925949-37935948 Setaria italica
Seita.2G282900 10.0kb downstream 10.0kb downstream 14016 true scaffold_2: 37935949-37949964 Setaria italica
Seita.2G282900 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 37939965-37949964 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183706 5267 Panicoideae View MSA
124585626 5269 Grass View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.891        
cufflinks 2.093        
cufflinks 2.405        
cufflinks 2.984       High
cufflinks 2.441        
cufflinks 1.825        
cufflinks 2.339        
cufflinks 1.419        
cufflinks 1.549        
cufflinks 0.895        
cufflinks 0.947        
cufflinks 0.663       Low
cufflinks 1.677        
cufflinks 5.003       High
cufflinks 0.686       Low
cufflinks 2.464        
cufflinks 0.341       Low
cufflinks 2.498        
cufflinks 2.447        
cufflinks 0.528       Low

0 Strain