Gene : Seita.2G290900 S. italica v2.2
Defline:  (1 of 1) PTHR20863//PTHR20863:SF35 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED Genomic Order:  2909
Name:  ? Seita.2G290900 Secondary Identifier:  ? PAC:32720098
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G290900 0.5kb upstream 0.5kb upstream 3588 true scaffold_2: 38660986-38664573 Setaria italica
Seita.2G290900 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 38664074-38664573 Setaria italica
Seita.2G290900 0.5kb downstream 0.5kb downstream 3588 true scaffold_2: 38660486-38664073 Setaria italica
Seita.2G290900 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 38660486-38660985 Setaria italica
Seita.2G290900 1.0kb upstream 1.0kb upstream 4088 true scaffold_2: 38660986-38665073 Setaria italica
Seita.2G290900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 38664074-38665073 Setaria italica
Seita.2G290900 1.0kb downstream 1.0kb downstream 4088 true scaffold_2: 38659986-38664073 Setaria italica
Seita.2G290900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 38659986-38660985 Setaria italica
Seita.2G290900 2.0kb upstream 2.0kb upstream 5088 true scaffold_2: 38660986-38666073 Setaria italica
Seita.2G290900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 38664074-38666073 Setaria italica
Seita.2G290900 2.0kb downstream 2.0kb downstream 5088 true scaffold_2: 38658986-38664073 Setaria italica
Seita.2G290900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 38658986-38660985 Setaria italica
Seita.2G290900 5.0kb upstream 5.0kb upstream 8088 true scaffold_2: 38660986-38669073 Setaria italica
Seita.2G290900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 38664074-38669073 Setaria italica
Seita.2G290900 5.0kb downstream 5.0kb downstream 8088 true scaffold_2: 38655986-38664073 Setaria italica
Seita.2G290900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 38655986-38660985 Setaria italica
Seita.2G290900 10.0kb upstream 10.0kb upstream 13088 true scaffold_2: 38660986-38674073 Setaria italica
Seita.2G290900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 38664074-38674073 Setaria italica
Seita.2G290900 10.0kb downstream 10.0kb downstream 13088 true scaffold_2: 38650986-38664073 Setaria italica
Seita.2G290900 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 38650986-38660985 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179742 5267 Panicoideae View MSA
124586574 5269 Grass View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.277        
cufflinks 15.362     High  
cufflinks 2.357       Low
cufflinks 1.29       Low
cufflinks 2.067       Low
cufflinks 14.739     High  
cufflinks 9.666        
cufflinks 19.25     High  
cufflinks 10.131        
cufflinks 43.407     High High
cufflinks 14.922     High  
cufflinks 12.516        
cufflinks 13.994     High  
cufflinks 7.171        
cufflinks 23.464     High High
cufflinks 4.813        
cufflinks 18.253     High  
cufflinks 3.944        
cufflinks 2.608       Low
cufflinks 22.035     High  

0 Strain