Gene : Seita.2G291900 S. italica v2.2
Defline:  (1 of 1) KOG3444 - Uncharacterized conserved protein Genomic Order:  2919
Name:  ? Seita.2G291900 Secondary Identifier:  ? PAC:32722870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G291900 0.5kb upstream 0.5kb upstream 3102 true scaffold_2: 38776029-38779130 Setaria italica
Seita.2G291900 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 38778631-38779130 Setaria italica
Seita.2G291900 0.5kb downstream 0.5kb downstream 3102 true scaffold_2: 38775529-38778630 Setaria italica
Seita.2G291900 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 38775529-38776028 Setaria italica
Seita.2G291900 1.0kb upstream 1.0kb upstream 3602 true scaffold_2: 38776029-38779630 Setaria italica
Seita.2G291900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 38778631-38779630 Setaria italica
Seita.2G291900 1.0kb downstream 1.0kb downstream 3602 true scaffold_2: 38775029-38778630 Setaria italica
Seita.2G291900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 38775029-38776028 Setaria italica
Seita.2G291900 2.0kb upstream 2.0kb upstream 4602 true scaffold_2: 38776029-38780630 Setaria italica
Seita.2G291900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 38778631-38780630 Setaria italica
Seita.2G291900 2.0kb downstream 2.0kb downstream 4602 true scaffold_2: 38774029-38778630 Setaria italica
Seita.2G291900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 38774029-38776028 Setaria italica
Seita.2G291900 5.0kb upstream 5.0kb upstream 7602 true scaffold_2: 38776029-38783630 Setaria italica
Seita.2G291900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 38778631-38783630 Setaria italica
Seita.2G291900 5.0kb downstream 5.0kb downstream 7602 true scaffold_2: 38771029-38778630 Setaria italica
Seita.2G291900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 38771029-38776028 Setaria italica
Seita.2G291900 10.0kb upstream 10.0kb upstream 12602 true scaffold_2: 38776029-38788630 Setaria italica
Seita.2G291900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 38778631-38788630 Setaria italica
Seita.2G291900 10.0kb downstream 10.0kb downstream 12602 true scaffold_2: 38766029-38778630 Setaria italica
Seita.2G291900 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 38766029-38776028 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179029 5267 Panicoideae View MSA
124579017 5269 Grass View MSA
122051418 5273 Angiosperm View MSA
121344842 5274 Embryophyte View MSA
123424203 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.719        
cufflinks 9.606        
cufflinks 9.185        
cufflinks 12.392     High  
cufflinks 8.101       Low
cufflinks 10.403        
cufflinks 9.696        
cufflinks 13.758     High  
cufflinks 7.36       Low
cufflinks 22.475     High High
cufflinks 11.357        
cufflinks 14.602     High  
cufflinks 18.531     High High
cufflinks 10.458        
cufflinks 15.382     High  
cufflinks 7.673       Low
cufflinks 18.309     High High
cufflinks 9.523        
cufflinks 10.7        
cufflinks 15.896     High  

0 Strain