Gene : Seita.2G293600 S. italica v2.2
Defline:  (1 of 130) PF02458 - Transferase family (Transferase) Genomic Order:  2936
Name:  ? Seita.2G293600 Secondary Identifier:  ? PAC:32722604
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G293600 0.5kb upstream 0.5kb upstream 2023 true scaffold_2: 38902346-38904368 Setaria italica
Seita.2G293600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 38902346-38902845 Setaria italica
Seita.2G293600 0.5kb downstream 0.5kb downstream 2023 true scaffold_2: 38902846-38904868 Setaria italica
Seita.2G293600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 38904369-38904868 Setaria italica
Seita.2G293600 1.0kb upstream 1.0kb upstream 2523 true scaffold_2: 38901846-38904368 Setaria italica
Seita.2G293600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 38901846-38902845 Setaria italica
Seita.2G293600 1.0kb downstream 1.0kb downstream 2523 true scaffold_2: 38902846-38905368 Setaria italica
Seita.2G293600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 38904369-38905368 Setaria italica
Seita.2G293600 2.0kb upstream 2.0kb upstream 3523 true scaffold_2: 38900846-38904368 Setaria italica
Seita.2G293600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 38900846-38902845 Setaria italica
Seita.2G293600 2.0kb downstream 2.0kb downstream 3523 true scaffold_2: 38902846-38906368 Setaria italica
Seita.2G293600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 38904369-38906368 Setaria italica
Seita.2G293600 5.0kb upstream 5.0kb upstream 6523 true scaffold_2: 38897846-38904368 Setaria italica
Seita.2G293600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 38897846-38902845 Setaria italica
Seita.2G293600 5.0kb downstream 5.0kb downstream 6523 true scaffold_2: 38902846-38909368 Setaria italica
Seita.2G293600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 38904369-38909368 Setaria italica
Seita.2G293600 10.0kb upstream 10.0kb upstream 11523 true scaffold_2: 38892846-38904368 Setaria italica
Seita.2G293600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 38892846-38902845 Setaria italica
Seita.2G293600 10.0kb downstream 10.0kb downstream 11523 true scaffold_2: 38902846-38914368 Setaria italica
Seita.2G293600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 38904369-38914368 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180326 5267 Panicoideae View MSA
124574053 5269 Grass View MSA
122051149 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.715        
cufflinks 0.174        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low Low
cufflinks 0.214        
cufflinks 0.051     Low Low
cufflinks 0.217        
cufflinks 0.416        
cufflinks 1.1        
cufflinks 0.639        
cufflinks 2.166       High
cufflinks 0.391        
cufflinks 0.102     Low  
cufflinks 4.806       High
cufflinks 0.064     Low  
cufflinks 1.772        
cufflinks 0.013     Low Low
cufflinks 0.614        
cufflinks 6.141       High

0 Strain