Gene : Seita.2G297500 S. italica v2.2
Defline:  (1 of 1) PTHR31223:SF14 - CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG5 Genomic Order:  2975
Name:  ? Seita.2G297500 Secondary Identifier:  ? PAC:32720423
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G297500 0.5kb upstream 0.5kb upstream 2849 true scaffold_2: 39142625-39145473 Setaria italica
Seita.2G297500 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39142625-39143124 Setaria italica
Seita.2G297500 0.5kb downstream 0.5kb downstream 2849 true scaffold_2: 39143125-39145973 Setaria italica
Seita.2G297500 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39145474-39145973 Setaria italica
Seita.2G297500 1.0kb upstream 1.0kb upstream 3349 true scaffold_2: 39142125-39145473 Setaria italica
Seita.2G297500 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39142125-39143124 Setaria italica
Seita.2G297500 1.0kb downstream 1.0kb downstream 3349 true scaffold_2: 39143125-39146473 Setaria italica
Seita.2G297500 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39145474-39146473 Setaria italica
Seita.2G297500 2.0kb upstream 2.0kb upstream 4349 true scaffold_2: 39141125-39145473 Setaria italica
Seita.2G297500 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39141125-39143124 Setaria italica
Seita.2G297500 2.0kb downstream 2.0kb downstream 4349 true scaffold_2: 39143125-39147473 Setaria italica
Seita.2G297500 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39145474-39147473 Setaria italica
Seita.2G297500 5.0kb upstream 5.0kb upstream 7349 true scaffold_2: 39138125-39145473 Setaria italica
Seita.2G297500 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39138125-39143124 Setaria italica
Seita.2G297500 5.0kb downstream 5.0kb downstream 7349 true scaffold_2: 39143125-39150473 Setaria italica
Seita.2G297500 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39145474-39150473 Setaria italica
Seita.2G297500 10.0kb upstream 10.0kb upstream 12349 true scaffold_2: 39133125-39145473 Setaria italica
Seita.2G297500 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39133125-39143124 Setaria italica
Seita.2G297500 10.0kb downstream 10.0kb downstream 12349 true scaffold_2: 39143125-39155473 Setaria italica
Seita.2G297500 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39145474-39155473 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177086 5267 Panicoideae View MSA
124569932 5269 Grass View MSA
122045300 5273 Angiosperm View MSA
121351757 5274 Embryophyte View MSA
123427506 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.829        
cufflinks 2.779       High
cufflinks 0.801        
cufflinks 0.999        
cufflinks 0.605        
cufflinks 3.349       High
cufflinks 1.335        
cufflinks 0.753        
cufflinks 0.661        
cufflinks 1.75        
cufflinks 0.81        
cufflinks 0.625        
cufflinks 1.022        
cufflinks 1.761        
cufflinks 4.156       High
cufflinks 0.816        
cufflinks 0.603        
cufflinks 1.697        
cufflinks 5.605       High
cufflinks 0.306       Low

0 Strain