Gene : Seita.2G248100 S. italica v2.2
Defline:  (1 of 2) PF01241 - Photosystem I psaG / psaK (PSI_PSAK) Genomic Order:  2481
Name:  ? Seita.2G248100 Secondary Identifier:  ? PAC:32720705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G248100 0.5kb upstream 0.5kb upstream 1765 true scaffold_2: 35151259-35153023 Setaria italica
Seita.2G248100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35151259-35151758 Setaria italica
Seita.2G248100 0.5kb downstream 0.5kb downstream 1765 true scaffold_2: 35151759-35153523 Setaria italica
Seita.2G248100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35153024-35153523 Setaria italica
Seita.2G248100 1.0kb upstream 1.0kb upstream 2265 true scaffold_2: 35150759-35153023 Setaria italica
Seita.2G248100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35150759-35151758 Setaria italica
Seita.2G248100 1.0kb downstream 1.0kb downstream 2265 true scaffold_2: 35151759-35154023 Setaria italica
Seita.2G248100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35153024-35154023 Setaria italica
Seita.2G248100 2.0kb upstream 2.0kb upstream 3265 true scaffold_2: 35149759-35153023 Setaria italica
Seita.2G248100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35149759-35151758 Setaria italica
Seita.2G248100 2.0kb downstream 2.0kb downstream 3265 true scaffold_2: 35151759-35155023 Setaria italica
Seita.2G248100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35153024-35155023 Setaria italica
Seita.2G248100 5.0kb upstream 5.0kb upstream 6265 true scaffold_2: 35146759-35153023 Setaria italica
Seita.2G248100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35146759-35151758 Setaria italica
Seita.2G248100 5.0kb downstream 5.0kb downstream 6265 true scaffold_2: 35151759-35158023 Setaria italica
Seita.2G248100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35153024-35158023 Setaria italica
Seita.2G248100 10.0kb upstream 10.0kb upstream 11265 true scaffold_2: 35141759-35153023 Setaria italica
Seita.2G248100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35141759-35151758 Setaria italica
Seita.2G248100 10.0kb downstream 10.0kb downstream 11265 true scaffold_2: 35151759-35163023 Setaria italica
Seita.2G248100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35153024-35163023 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184977 5267 Panicoideae View MSA
124576888 5269 Grass View MSA
122046392 5273 Angiosperm View MSA
121348949 5274 Embryophyte View MSA
123425419 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.944     High  
cufflinks 43.436     High  
cufflinks 260.396     High  
cufflinks 379.791     High  
cufflinks 579.184     High High
cufflinks 40.262     High  
cufflinks 353.798     High  
cufflinks 693.08     High High
cufflinks 337.223     High  
cufflinks 18.391     High  
cufflinks 5.706        
cufflinks 0.29       Low
cufflinks 3.05        
cufflinks 104.334     High  
cufflinks 0.449       Low
cufflinks 331.147     High  
cufflinks 0.344       Low
cufflinks 22.739     High  
cufflinks 296.349     High  
cufflinks 0.24       Low

0 Strain