Gene : Seita.2G262500 S. italica v2.2
Defline:  (1 of 18) PF03188 - Eukaryotic cytochrome b561 (Cytochrom_B561) Genomic Order:  2625
Name:  ? Seita.2G262500 Secondary Identifier:  ? PAC:32721521
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G262500 0.5kb upstream 0.5kb upstream 1934 true scaffold_2: 36424597-36426530 Setaria italica
Seita.2G262500 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 36426031-36426530 Setaria italica
Seita.2G262500 0.5kb downstream 0.5kb downstream 1934 true scaffold_2: 36424097-36426030 Setaria italica
Seita.2G262500 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 36424097-36424596 Setaria italica
Seita.2G262500 1.0kb upstream 1.0kb upstream 2434 true scaffold_2: 36424597-36427030 Setaria italica
Seita.2G262500 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 36426031-36427030 Setaria italica
Seita.2G262500 1.0kb downstream 1.0kb downstream 2434 true scaffold_2: 36423597-36426030 Setaria italica
Seita.2G262500 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 36423597-36424596 Setaria italica
Seita.2G262500 2.0kb upstream 2.0kb upstream 3434 true scaffold_2: 36424597-36428030 Setaria italica
Seita.2G262500 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 36426031-36428030 Setaria italica
Seita.2G262500 2.0kb downstream 2.0kb downstream 3434 true scaffold_2: 36422597-36426030 Setaria italica
Seita.2G262500 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 36422597-36424596 Setaria italica
Seita.2G262500 5.0kb upstream 5.0kb upstream 6434 true scaffold_2: 36424597-36431030 Setaria italica
Seita.2G262500 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 36426031-36431030 Setaria italica
Seita.2G262500 5.0kb downstream 5.0kb downstream 6434 true scaffold_2: 36419597-36426030 Setaria italica
Seita.2G262500 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 36419597-36424596 Setaria italica
Seita.2G262500 10.0kb upstream 10.0kb upstream 11434 true scaffold_2: 36424597-36436030 Setaria italica
Seita.2G262500 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 36426031-36436030 Setaria italica
Seita.2G262500 10.0kb downstream 10.0kb downstream 11434 true scaffold_2: 36414597-36426030 Setaria italica
Seita.2G262500 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 36414597-36424596 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029802 5273 Angiosperm View MSA
122117357 5267 Panicoideae View MSA
124411519 5269 Grass View MSA
121299077 5274 Embryophyte View MSA
123337000 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.333        
cufflinks 5.584        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.17       Low
cufflinks 9.11       High
cufflinks 1.198        
cufflinks 0.686        
cufflinks 0.588        
cufflinks 11.978       High
cufflinks 2.346        
cufflinks 1.341        
cufflinks 6.236       High
cufflinks 0.101     Low Low
cufflinks 3.199        
cufflinks 1.016        
cufflinks 2.484        
cufflinks 0.292       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.026        

0 Strain