Gene : Seita.2G261700 S. italica v2.2
Defline:  (1 of 1) PTHR12910:SF1 - NADH:UBIQUINONE OXIDOREDUCTASE SUBUNIT-17.2 Genomic Order:  2617
Name:  ? Seita.2G261700 Secondary Identifier:  ? PAC:32721056
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G261700 0.5kb upstream 0.5kb upstream 3678 true scaffold_2: 36382479-36386156 Setaria italica
Seita.2G261700 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 36385657-36386156 Setaria italica
Seita.2G261700 0.5kb downstream 0.5kb downstream 3678 true scaffold_2: 36381979-36385656 Setaria italica
Seita.2G261700 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 36381979-36382478 Setaria italica
Seita.2G261700 1.0kb upstream 1.0kb upstream 4178 true scaffold_2: 36382479-36386656 Setaria italica
Seita.2G261700 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 36385657-36386656 Setaria italica
Seita.2G261700 1.0kb downstream 1.0kb downstream 4178 true scaffold_2: 36381479-36385656 Setaria italica
Seita.2G261700 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 36381479-36382478 Setaria italica
Seita.2G261700 2.0kb upstream 2.0kb upstream 5178 true scaffold_2: 36382479-36387656 Setaria italica
Seita.2G261700 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 36385657-36387656 Setaria italica
Seita.2G261700 2.0kb downstream 2.0kb downstream 5178 true scaffold_2: 36380479-36385656 Setaria italica
Seita.2G261700 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 36380479-36382478 Setaria italica
Seita.2G261700 5.0kb upstream 5.0kb upstream 8178 true scaffold_2: 36382479-36390656 Setaria italica
Seita.2G261700 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 36385657-36390656 Setaria italica
Seita.2G261700 5.0kb downstream 5.0kb downstream 8178 true scaffold_2: 36377479-36385656 Setaria italica
Seita.2G261700 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 36377479-36382478 Setaria italica
Seita.2G261700 10.0kb upstream 10.0kb upstream 13178 true scaffold_2: 36382479-36395656 Setaria italica
Seita.2G261700 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 36385657-36395656 Setaria italica
Seita.2G261700 10.0kb downstream 10.0kb downstream 13178 true scaffold_2: 36372479-36385656 Setaria italica
Seita.2G261700 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 36372479-36382478 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179732 5267 Panicoideae View MSA
124586591 5269 Grass View MSA
122041716 5273 Angiosperm View MSA
121346222 5274 Embryophyte View MSA
123424821 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.251        
cufflinks 3.337        
cufflinks 3.118        
cufflinks 3.308        
cufflinks 2.471       Low
cufflinks 3.536        
cufflinks 2.383       Low
cufflinks 3.889        
cufflinks 2.91        
cufflinks 3.789        
cufflinks 3.171        
cufflinks 5.61       High
cufflinks 5.031       High
cufflinks 3.313        
cufflinks 4.051        
cufflinks 3.5        
cufflinks 6.675       High
cufflinks 5.482       High
cufflinks 2.706       Low
cufflinks 5.656       High

0 Strain