Gene : Seita.2G264200 S. italica v2.2
Defline:  (1 of 2) PF14780 - Domain of unknown function (DUF4477) (DUF4477) Genomic Order:  2642
Name:  ? Seita.2G264200 Secondary Identifier:  ? PAC:32723582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G264200 0.5kb upstream 0.5kb upstream 4306 true scaffold_2: 36556338-36560643 Setaria italica
Seita.2G264200 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 36560144-36560643 Setaria italica
Seita.2G264200 0.5kb downstream 0.5kb downstream 4306 true scaffold_2: 36555838-36560143 Setaria italica
Seita.2G264200 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 36555838-36556337 Setaria italica
Seita.2G264200 1.0kb upstream 1.0kb upstream 4806 true scaffold_2: 36556338-36561143 Setaria italica
Seita.2G264200 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 36560144-36561143 Setaria italica
Seita.2G264200 1.0kb downstream 1.0kb downstream 4806 true scaffold_2: 36555338-36560143 Setaria italica
Seita.2G264200 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 36555338-36556337 Setaria italica
Seita.2G264200 2.0kb upstream 2.0kb upstream 5806 true scaffold_2: 36556338-36562143 Setaria italica
Seita.2G264200 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 36560144-36562143 Setaria italica
Seita.2G264200 2.0kb downstream 2.0kb downstream 5806 true scaffold_2: 36554338-36560143 Setaria italica
Seita.2G264200 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 36554338-36556337 Setaria italica
Seita.2G264200 5.0kb upstream 5.0kb upstream 8806 true scaffold_2: 36556338-36565143 Setaria italica
Seita.2G264200 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 36560144-36565143 Setaria italica
Seita.2G264200 5.0kb downstream 5.0kb downstream 8806 true scaffold_2: 36551338-36560143 Setaria italica
Seita.2G264200 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 36551338-36556337 Setaria italica
Seita.2G264200 10.0kb upstream 10.0kb upstream 13806 true scaffold_2: 36556338-36570143 Setaria italica
Seita.2G264200 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 36560144-36570143 Setaria italica
Seita.2G264200 10.0kb downstream 10.0kb downstream 13806 true scaffold_2: 36546338-36560143 Setaria italica
Seita.2G264200 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 36546338-36556337 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191178 5267 Panicoideae View MSA
124571603 5269 Grass View MSA
122045884 5273 Angiosperm View MSA
121347885 5274 Embryophyte View MSA
123380665 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.006        
cufflinks 3.697        
cufflinks 3.761        
cufflinks 3.583        
cufflinks 2.94        
cufflinks 4.272        
cufflinks 3.401        
cufflinks 4.621        
cufflinks 2.906        
cufflinks 3.33        
cufflinks 3.591        
cufflinks 4.347        
cufflinks 2.834       Low
cufflinks 2.925        
cufflinks 3.719        
cufflinks 5.723       High
cufflinks 5.564       High
cufflinks 8.29       High
cufflinks 2.444       Low
cufflinks 3.904        

0 Strain