Gene : Seita.2G267300 S. italica v2.2
Defline:  (1 of 2) PTHR22811:SF50 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24BETA2 Genomic Order:  2673
Name:  ? Seita.2G267300 Secondary Identifier:  ? PAC:32720911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G267300 0.5kb upstream 0.5kb upstream 3699 true scaffold_2: 36784816-36788514 Setaria italica
Seita.2G267300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 36788015-36788514 Setaria italica
Seita.2G267300 0.5kb downstream 0.5kb downstream 3699 true scaffold_2: 36784316-36788014 Setaria italica
Seita.2G267300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 36784316-36784815 Setaria italica
Seita.2G267300 1.0kb upstream 1.0kb upstream 4199 true scaffold_2: 36784816-36789014 Setaria italica
Seita.2G267300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 36788015-36789014 Setaria italica
Seita.2G267300 1.0kb downstream 1.0kb downstream 4199 true scaffold_2: 36783816-36788014 Setaria italica
Seita.2G267300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 36783816-36784815 Setaria italica
Seita.2G267300 2.0kb upstream 2.0kb upstream 5199 true scaffold_2: 36784816-36790014 Setaria italica
Seita.2G267300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 36788015-36790014 Setaria italica
Seita.2G267300 2.0kb downstream 2.0kb downstream 5199 true scaffold_2: 36782816-36788014 Setaria italica
Seita.2G267300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 36782816-36784815 Setaria italica
Seita.2G267300 5.0kb upstream 5.0kb upstream 8199 true scaffold_2: 36784816-36793014 Setaria italica
Seita.2G267300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 36788015-36793014 Setaria italica
Seita.2G267300 5.0kb downstream 5.0kb downstream 8199 true scaffold_2: 36779816-36788014 Setaria italica
Seita.2G267300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 36779816-36784815 Setaria italica
Seita.2G267300 10.0kb upstream 10.0kb upstream 13199 true scaffold_2: 36784816-36798014 Setaria italica
Seita.2G267300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 36788015-36798014 Setaria italica
Seita.2G267300 10.0kb downstream 10.0kb downstream 13199 true scaffold_2: 36774816-36788014 Setaria italica
Seita.2G267300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 36774816-36784815 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184792 5267 Panicoideae View MSA
124587719 5269 Grass View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.16        
cufflinks 0.216        
cufflinks 0.096        
cufflinks 0.067     Low  
cufflinks 0.063     Low Low
cufflinks 0.265        
cufflinks 0.107     Low  
cufflinks 0.253        
cufflinks 0.228        
cufflinks 0.602       High
cufflinks 0.19        
cufflinks 0.733       High
cufflinks 0.411        
cufflinks 0.144        
cufflinks 0.833       High
cufflinks 0.046     Low Low
cufflinks 0.578       High
cufflinks 0.013     Low Low
cufflinks 0.219        
cufflinks 0.827       High

0 Strain