Gene : Seita.2G270800 S. italica v2.2
Defline:  (1 of 1) KOG3294 - WW domain binding protein WBP-2, contains GRAM domain Genomic Order:  2708
Name:  ? Seita.2G270800 Secondary Identifier:  ? PAC:32722122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G270800 0.5kb upstream 0.5kb upstream 4001 true scaffold_2: 37102552-37106552 Setaria italica
Seita.2G270800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 37102552-37103051 Setaria italica
Seita.2G270800 0.5kb downstream 0.5kb downstream 4001 true scaffold_2: 37103052-37107052 Setaria italica
Seita.2G270800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 37106553-37107052 Setaria italica
Seita.2G270800 1.0kb upstream 1.0kb upstream 4501 true scaffold_2: 37102052-37106552 Setaria italica
Seita.2G270800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 37102052-37103051 Setaria italica
Seita.2G270800 1.0kb downstream 1.0kb downstream 4501 true scaffold_2: 37103052-37107552 Setaria italica
Seita.2G270800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 37106553-37107552 Setaria italica
Seita.2G270800 2.0kb upstream 2.0kb upstream 5501 true scaffold_2: 37101052-37106552 Setaria italica
Seita.2G270800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 37101052-37103051 Setaria italica
Seita.2G270800 2.0kb downstream 2.0kb downstream 5501 true scaffold_2: 37103052-37108552 Setaria italica
Seita.2G270800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 37106553-37108552 Setaria italica
Seita.2G270800 5.0kb upstream 5.0kb upstream 8501 true scaffold_2: 37098052-37106552 Setaria italica
Seita.2G270800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 37098052-37103051 Setaria italica
Seita.2G270800 5.0kb downstream 5.0kb downstream 8501 true scaffold_2: 37103052-37111552 Setaria italica
Seita.2G270800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 37106553-37111552 Setaria italica
Seita.2G270800 10.0kb upstream 10.0kb upstream 13501 true scaffold_2: 37093052-37106552 Setaria italica
Seita.2G270800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 37093052-37103051 Setaria italica
Seita.2G270800 10.0kb downstream 10.0kb downstream 13501 true scaffold_2: 37103052-37116552 Setaria italica
Seita.2G270800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 37106553-37116552 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184476 5267 Panicoideae View MSA
124578210 5269 Grass View MSA
122045480 5273 Angiosperm View MSA
121350995 5274 Embryophyte View MSA
123424898 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.316     High  
cufflinks 25.845     High  
cufflinks 29.248     High  
cufflinks 35.596     High High
cufflinks 27.117     High  
cufflinks 25.879     High  
cufflinks 22.284     High  
cufflinks 22.785     High  
cufflinks 19.404     High Low
cufflinks 25.569     High  
cufflinks 23.949     High  
cufflinks 39.079     High High
cufflinks 35.531     High High
cufflinks 26.675     High  
cufflinks 28.743     High  
cufflinks 17.998     High Low
cufflinks 31.119     High  
cufflinks 33.471     High High
cufflinks 32.423     High  
cufflinks 27.658     High  

0 Strain