Gene : Seita.2G272600 S. italica v2.2
Defline:  (1 of 1) PF14953 - Domain of unknown function (DUF4504) (DUF4504) Genomic Order:  2726
Name:  ? Seita.2G272600 Secondary Identifier:  ? PAC:32721316
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G272600 0.5kb upstream 0.5kb upstream 3916 true scaffold_2: 37224938-37228853 Setaria italica
Seita.2G272600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 37228354-37228853 Setaria italica
Seita.2G272600 0.5kb downstream 0.5kb downstream 3916 true scaffold_2: 37224438-37228353 Setaria italica
Seita.2G272600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 37224438-37224937 Setaria italica
Seita.2G272600 1.0kb upstream 1.0kb upstream 4416 true scaffold_2: 37224938-37229353 Setaria italica
Seita.2G272600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 37228354-37229353 Setaria italica
Seita.2G272600 1.0kb downstream 1.0kb downstream 4416 true scaffold_2: 37223938-37228353 Setaria italica
Seita.2G272600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 37223938-37224937 Setaria italica
Seita.2G272600 2.0kb upstream 2.0kb upstream 5416 true scaffold_2: 37224938-37230353 Setaria italica
Seita.2G272600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 37228354-37230353 Setaria italica
Seita.2G272600 2.0kb downstream 2.0kb downstream 5416 true scaffold_2: 37222938-37228353 Setaria italica
Seita.2G272600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 37222938-37224937 Setaria italica
Seita.2G272600 5.0kb upstream 5.0kb upstream 8416 true scaffold_2: 37224938-37233353 Setaria italica
Seita.2G272600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 37228354-37233353 Setaria italica
Seita.2G272600 5.0kb downstream 5.0kb downstream 8416 true scaffold_2: 37219938-37228353 Setaria italica
Seita.2G272600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 37219938-37224937 Setaria italica
Seita.2G272600 10.0kb upstream 10.0kb upstream 13416 true scaffold_2: 37224938-37238353 Setaria italica
Seita.2G272600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 37228354-37238353 Setaria italica
Seita.2G272600 10.0kb downstream 10.0kb downstream 13416 true scaffold_2: 37214938-37228353 Setaria italica
Seita.2G272600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 37214938-37224937 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176964 5267 Panicoideae View MSA
124583735 5269 Grass View MSA
122045029 5273 Angiosperm View MSA
121351550 5274 Embryophyte View MSA
123382222 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.658       High
cufflinks 2.072        
cufflinks 1.35        
cufflinks 1.456        
cufflinks 1.355        
cufflinks 2.3       High
cufflinks 1.399        
cufflinks 1.774        
cufflinks 1.641        
cufflinks 2.102        
cufflinks 1.611        
cufflinks 1.535        
cufflinks 1.737        
cufflinks 1.34        
cufflinks 1.583        
cufflinks 1.702        
cufflinks 2.26       High
cufflinks 1.645        
cufflinks 0.894       Low
cufflinks 1.697        

0 Strain