Gene : Seita.2G357000 S. italica v2.2
Defline:  (1 of 1) PTHR21426:SF2 - EXOCYST COMPLEX COMPONENT EXO84C Genomic Order:  3570
Name:  ? Seita.2G357000 Secondary Identifier:  ? PAC:32721242
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G357000 0.5kb upstream 0.5kb upstream 5796 true scaffold_2: 43570399-43576194 Setaria italica
Seita.2G357000 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 43575695-43576194 Setaria italica
Seita.2G357000 0.5kb downstream 0.5kb downstream 5796 true scaffold_2: 43569899-43575694 Setaria italica
Seita.2G357000 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 43569899-43570398 Setaria italica
Seita.2G357000 1.0kb upstream 1.0kb upstream 6296 true scaffold_2: 43570399-43576694 Setaria italica
Seita.2G357000 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 43575695-43576694 Setaria italica
Seita.2G357000 1.0kb downstream 1.0kb downstream 6296 true scaffold_2: 43569399-43575694 Setaria italica
Seita.2G357000 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 43569399-43570398 Setaria italica
Seita.2G357000 2.0kb upstream 2.0kb upstream 7296 true scaffold_2: 43570399-43577694 Setaria italica
Seita.2G357000 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 43575695-43577694 Setaria italica
Seita.2G357000 2.0kb downstream 2.0kb downstream 7296 true scaffold_2: 43568399-43575694 Setaria italica
Seita.2G357000 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 43568399-43570398 Setaria italica
Seita.2G357000 5.0kb upstream 5.0kb upstream 10296 true scaffold_2: 43570399-43580694 Setaria italica
Seita.2G357000 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 43575695-43580694 Setaria italica
Seita.2G357000 5.0kb downstream 5.0kb downstream 10296 true scaffold_2: 43565399-43575694 Setaria italica
Seita.2G357000 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 43565399-43570398 Setaria italica
Seita.2G357000 10.0kb upstream 10.0kb upstream 15296 true scaffold_2: 43570399-43585694 Setaria italica
Seita.2G357000 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 43575695-43585694 Setaria italica
Seita.2G357000 10.0kb downstream 10.0kb downstream 15296 true scaffold_2: 43560399-43575694 Setaria italica
Seita.2G357000 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 43560399-43570398 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179944 5267 Panicoideae View MSA
124571840 5269 Grass View MSA
122042484 5273 Angiosperm View MSA
121309976 5274 Embryophyte View MSA
123347590 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.36        
cufflinks 17.778     High High
cufflinks 0.967       Low
cufflinks 1.242       Low
cufflinks 2.252        
cufflinks 16.052     High High
cufflinks 7.617        
cufflinks 6.762        
cufflinks 7.536        
cufflinks 4.635        
cufflinks 9.191        
cufflinks 6.371        
cufflinks 5.945        
cufflinks 1.035       Low
cufflinks 11.565        
cufflinks 3.965        
cufflinks 6.112        
cufflinks 2.553        
cufflinks 0.613       Low
cufflinks 8.336        

0 Strain