Gene : Seita.2G357700 S. italica v2.2
Defline:  (1 of 1) PTHR33510:SF6 - PROTEIN TIC 20-I, CHLOROPLASTIC Genomic Order:  3577
Name:  ? Seita.2G357700 Secondary Identifier:  ? PAC:32720767
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G357700 0.5kb upstream 0.5kb upstream 3763 true scaffold_2: 43619120-43622882 Setaria italica
Seita.2G357700 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 43622383-43622882 Setaria italica
Seita.2G357700 0.5kb downstream 0.5kb downstream 3763 true scaffold_2: 43618620-43622382 Setaria italica
Seita.2G357700 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 43618620-43619119 Setaria italica
Seita.2G357700 1.0kb upstream 1.0kb upstream 4263 true scaffold_2: 43619120-43623382 Setaria italica
Seita.2G357700 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 43622383-43623382 Setaria italica
Seita.2G357700 1.0kb downstream 1.0kb downstream 4263 true scaffold_2: 43618120-43622382 Setaria italica
Seita.2G357700 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 43618120-43619119 Setaria italica
Seita.2G357700 2.0kb upstream 2.0kb upstream 5263 true scaffold_2: 43619120-43624382 Setaria italica
Seita.2G357700 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 43622383-43624382 Setaria italica
Seita.2G357700 2.0kb downstream 2.0kb downstream 5263 true scaffold_2: 43617120-43622382 Setaria italica
Seita.2G357700 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 43617120-43619119 Setaria italica
Seita.2G357700 5.0kb upstream 5.0kb upstream 8263 true scaffold_2: 43619120-43627382 Setaria italica
Seita.2G357700 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 43622383-43627382 Setaria italica
Seita.2G357700 5.0kb downstream 5.0kb downstream 8263 true scaffold_2: 43614120-43622382 Setaria italica
Seita.2G357700 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 43614120-43619119 Setaria italica
Seita.2G357700 10.0kb upstream 10.0kb upstream 13263 true scaffold_2: 43619120-43632382 Setaria italica
Seita.2G357700 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 43622383-43632382 Setaria italica
Seita.2G357700 10.0kb downstream 10.0kb downstream 13263 true scaffold_2: 43609120-43622382 Setaria italica
Seita.2G357700 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 43609120-43619119 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198426 5267 Panicoideae View MSA
124589976 5269 Grass View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.484        
cufflinks 8.796        
cufflinks 10.18        
cufflinks 6.761        
cufflinks 12.053     High  
cufflinks 8.585        
cufflinks 18.954     High High
cufflinks 26.235     High High
cufflinks 38.656     High High
cufflinks 9.454        
cufflinks 7.638        
cufflinks 5.207       Low
cufflinks 4.885       Low
cufflinks 16.299     High  
cufflinks 4.283       Low
cufflinks 13.208     High  
cufflinks 4.659       Low
cufflinks 11.475     High  
cufflinks 9.901        
cufflinks 4.637       Low

0 Strain