Gene : Seita.2G384600 S. italica v2.2
Defline:  (1 of 1) PF05421 - Protein of unknown function (DUF751) (DUF751) Genomic Order:  3846
Name:  ? Seita.2G384600 Secondary Identifier:  ? PAC:32722919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G384600 0.5kb upstream 0.5kb upstream 1625 true scaffold_2: 45348626-45350250 Setaria italica
Seita.2G384600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 45348626-45349125 Setaria italica
Seita.2G384600 0.5kb downstream 0.5kb downstream 1625 true scaffold_2: 45349126-45350750 Setaria italica
Seita.2G384600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 45350251-45350750 Setaria italica
Seita.2G384600 1.0kb upstream 1.0kb upstream 2125 true scaffold_2: 45348126-45350250 Setaria italica
Seita.2G384600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 45348126-45349125 Setaria italica
Seita.2G384600 1.0kb downstream 1.0kb downstream 2125 true scaffold_2: 45349126-45351250 Setaria italica
Seita.2G384600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 45350251-45351250 Setaria italica
Seita.2G384600 2.0kb upstream 2.0kb upstream 3125 true scaffold_2: 45347126-45350250 Setaria italica
Seita.2G384600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 45347126-45349125 Setaria italica
Seita.2G384600 2.0kb downstream 2.0kb downstream 3125 true scaffold_2: 45349126-45352250 Setaria italica
Seita.2G384600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 45350251-45352250 Setaria italica
Seita.2G384600 5.0kb upstream 5.0kb upstream 6125 true scaffold_2: 45344126-45350250 Setaria italica
Seita.2G384600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 45344126-45349125 Setaria italica
Seita.2G384600 5.0kb downstream 5.0kb downstream 6125 true scaffold_2: 45349126-45355250 Setaria italica
Seita.2G384600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 45350251-45355250 Setaria italica
Seita.2G384600 10.0kb upstream 10.0kb upstream 11125 true scaffold_2: 45339126-45350250 Setaria italica
Seita.2G384600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 45339126-45349125 Setaria italica
Seita.2G384600 10.0kb downstream 10.0kb downstream 11125 true scaffold_2: 45349126-45360250 Setaria italica
Seita.2G384600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 45350251-45360250 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175875 5267 Panicoideae View MSA
124571258 5269 Grass View MSA
122045561 5273 Angiosperm View MSA
121348073 5274 Embryophyte View MSA
123380720 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.18        
cufflinks 6.615        
cufflinks 13.762     High  
cufflinks 14.846     High  
cufflinks 27.582     High  
cufflinks 7.649        
cufflinks 24.763     High  
cufflinks 30.438     High  
cufflinks 38.081     High High
cufflinks 9.468        
cufflinks 5.617        
cufflinks 0.247       Low
cufflinks 0.777       Low
cufflinks 16.45     High  
cufflinks 0.065     Low Low
cufflinks 31.461     High  
cufflinks 0.627       Low
cufflinks 7.223        
cufflinks 26.0     High  
cufflinks 0.261       Low

0 Strain