Gene : Seita.2G322300 S. italica v2.2
Defline:  (1 of 1) PTHR13822:SF7 - ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL Genomic Order:  3223
Name:  ? Seita.2G322300 Secondary Identifier:  ? PAC:32722034
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G322300 0.5kb upstream 0.5kb upstream 3697 true scaffold_2: 41075709-41079405 Setaria italica
Seita.2G322300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41075709-41076208 Setaria italica
Seita.2G322300 0.5kb downstream 0.5kb downstream 3697 true scaffold_2: 41076209-41079905 Setaria italica
Seita.2G322300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41079406-41079905 Setaria italica
Seita.2G322300 1.0kb upstream 1.0kb upstream 4197 true scaffold_2: 41075209-41079405 Setaria italica
Seita.2G322300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41075209-41076208 Setaria italica
Seita.2G322300 1.0kb downstream 1.0kb downstream 4197 true scaffold_2: 41076209-41080405 Setaria italica
Seita.2G322300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41079406-41080405 Setaria italica
Seita.2G322300 2.0kb upstream 2.0kb upstream 5197 true scaffold_2: 41074209-41079405 Setaria italica
Seita.2G322300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41074209-41076208 Setaria italica
Seita.2G322300 2.0kb downstream 2.0kb downstream 5197 true scaffold_2: 41076209-41081405 Setaria italica
Seita.2G322300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41079406-41081405 Setaria italica
Seita.2G322300 5.0kb upstream 5.0kb upstream 8197 true scaffold_2: 41071209-41079405 Setaria italica
Seita.2G322300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41071209-41076208 Setaria italica
Seita.2G322300 5.0kb downstream 5.0kb downstream 8197 true scaffold_2: 41076209-41084405 Setaria italica
Seita.2G322300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41079406-41084405 Setaria italica
Seita.2G322300 10.0kb upstream 10.0kb upstream 13197 true scaffold_2: 41066209-41079405 Setaria italica
Seita.2G322300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41066209-41076208 Setaria italica
Seita.2G322300 10.0kb downstream 10.0kb downstream 13197 true scaffold_2: 41076209-41089405 Setaria italica
Seita.2G322300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41079406-41089405 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194066 5267 Panicoideae View MSA
124580618 5269 Grass View MSA
122041569 5273 Angiosperm View MSA
121344624 5274 Embryophyte View MSA
123424510 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.934     High  
cufflinks 32.577     High  
cufflinks 18.537     High  
cufflinks 19.211     High  
cufflinks 20.925     High  
cufflinks 34.733     High  
cufflinks 20.053     High  
cufflinks 52.024     High  
cufflinks 30.88     High  
cufflinks 52.55     High  
cufflinks 33.309     High  
cufflinks 46.739     High  
cufflinks 52.649     High  
cufflinks 21.315     High  
cufflinks 39.381     High  
cufflinks 7.978       Low
cufflinks 63.924     High High
cufflinks 4.553       Low
cufflinks 22.514     High  
cufflinks 62.118     High High

0 Strain