Gene : Seita.2G326400 S. italica v2.2
Defline:  (1 of 2) PTHR10663//PTHR10663:SF163 - GUANYL-NUCLEOTIDE EXCHANGE FACTOR Genomic Order:  3264
Name:  ? Seita.2G326400 Secondary Identifier:  ? PAC:32718674
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G326400 0.5kb upstream 0.5kb upstream 5993 true scaffold_2: 41390664-41396656 Setaria italica
Seita.2G326400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41396157-41396656 Setaria italica
Seita.2G326400 0.5kb downstream 0.5kb downstream 5993 true scaffold_2: 41390164-41396156 Setaria italica
Seita.2G326400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41390164-41390663 Setaria italica
Seita.2G326400 1.0kb upstream 1.0kb upstream 6493 true scaffold_2: 41390664-41397156 Setaria italica
Seita.2G326400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41396157-41397156 Setaria italica
Seita.2G326400 1.0kb downstream 1.0kb downstream 6493 true scaffold_2: 41389664-41396156 Setaria italica
Seita.2G326400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41389664-41390663 Setaria italica
Seita.2G326400 2.0kb upstream 2.0kb upstream 7493 true scaffold_2: 41390664-41398156 Setaria italica
Seita.2G326400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41396157-41398156 Setaria italica
Seita.2G326400 2.0kb downstream 2.0kb downstream 7493 true scaffold_2: 41388664-41396156 Setaria italica
Seita.2G326400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41388664-41390663 Setaria italica
Seita.2G326400 5.0kb upstream 5.0kb upstream 10493 true scaffold_2: 41390664-41401156 Setaria italica
Seita.2G326400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41396157-41401156 Setaria italica
Seita.2G326400 5.0kb downstream 5.0kb downstream 10493 true scaffold_2: 41385664-41396156 Setaria italica
Seita.2G326400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41385664-41390663 Setaria italica
Seita.2G326400 10.0kb upstream 10.0kb upstream 15493 true scaffold_2: 41390664-41406156 Setaria italica
Seita.2G326400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41396157-41406156 Setaria italica
Seita.2G326400 10.0kb downstream 10.0kb downstream 15493 true scaffold_2: 41380664-41396156 Setaria italica
Seita.2G326400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41380664-41390663 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184743 5267 Panicoideae View MSA
124589185 5269 Grass View MSA
122043721 5273 Angiosperm View MSA
121310176 5274 Embryophyte View MSA
123347741 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.425        
cufflinks 7.074       High
cufflinks 2.138       Low
cufflinks 1.77       Low
cufflinks 1.431       Low
cufflinks 5.673        
cufflinks 4.166        
cufflinks 3.612        
cufflinks 3.218        
cufflinks 4.023        
cufflinks 5.133        
cufflinks 5.049        
cufflinks 4.195        
cufflinks 3.068        
cufflinks 6.511       High
cufflinks 2.926        
cufflinks 5.894        
cufflinks 2.758        
cufflinks 2.628        
cufflinks 6.012       High

0 Strain