Gene : Seita.2G325100 S. italica v2.2
Defline:  (1 of 1) PTHR23423//PTHR23423:SF15 - ORGANIC SOLUTE TRANSPORTER-RELATED Genomic Order:  3251
Name:  ? Seita.2G325100 Secondary Identifier:  ? PAC:32720130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G325100 0.5kb upstream 0.5kb upstream 5696 true scaffold_2: 41286963-41292658 Setaria italica
Seita.2G325100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41292159-41292658 Setaria italica
Seita.2G325100 0.5kb downstream 0.5kb downstream 5696 true scaffold_2: 41286463-41292158 Setaria italica
Seita.2G325100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41286463-41286962 Setaria italica
Seita.2G325100 1.0kb upstream 1.0kb upstream 6196 true scaffold_2: 41286963-41293158 Setaria italica
Seita.2G325100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41292159-41293158 Setaria italica
Seita.2G325100 1.0kb downstream 1.0kb downstream 6196 true scaffold_2: 41285963-41292158 Setaria italica
Seita.2G325100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41285963-41286962 Setaria italica
Seita.2G325100 2.0kb upstream 2.0kb upstream 7196 true scaffold_2: 41286963-41294158 Setaria italica
Seita.2G325100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41292159-41294158 Setaria italica
Seita.2G325100 2.0kb downstream 2.0kb downstream 7196 true scaffold_2: 41284963-41292158 Setaria italica
Seita.2G325100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41284963-41286962 Setaria italica
Seita.2G325100 5.0kb upstream 5.0kb upstream 10196 true scaffold_2: 41286963-41297158 Setaria italica
Seita.2G325100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41292159-41297158 Setaria italica
Seita.2G325100 5.0kb downstream 5.0kb downstream 10196 true scaffold_2: 41281963-41292158 Setaria italica
Seita.2G325100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41281963-41286962 Setaria italica
Seita.2G325100 10.0kb upstream 10.0kb upstream 15196 true scaffold_2: 41286963-41302158 Setaria italica
Seita.2G325100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41292159-41302158 Setaria italica
Seita.2G325100 10.0kb downstream 10.0kb downstream 15196 true scaffold_2: 41276963-41292158 Setaria italica
Seita.2G325100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41276963-41286962 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176039 5267 Panicoideae View MSA
124571587 5269 Grass View MSA
122044930 5273 Angiosperm View MSA
121344114 5274 Embryophyte View MSA
123379976 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.021     High  
cufflinks 23.714     High  
cufflinks 13.455     High  
cufflinks 13.846     High  
cufflinks 15.266     High  
cufflinks 23.587     High  
cufflinks 13.974     High  
cufflinks 19.772     High  
cufflinks 20.253     High  
cufflinks 32.956     High High
cufflinks 30.241     High High
cufflinks 17.592     High  
cufflinks 39.477     High High
cufflinks 21.329     High  
cufflinks 22.508     High  
cufflinks 9.162       Low
cufflinks 24.49     High  
cufflinks 10.345       Low
cufflinks 16.038     High  
cufflinks 22.996     High  

0 Strain