Gene : Seita.2G327300 S. italica v2.2
Defline:  (1 of 2) PTHR11727:SF12 - DIMETHYLADENOSINE TRANSFERASE-LIKE PROTEIN Genomic Order:  3273
Name:  ? Seita.2G327300 Secondary Identifier:  ? PAC:32721248
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G327300 0.5kb upstream 0.5kb upstream 2326 true scaffold_2: 41482050-41484375 Setaria italica
Seita.2G327300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41482050-41482549 Setaria italica
Seita.2G327300 0.5kb downstream 0.5kb downstream 2326 true scaffold_2: 41482550-41484875 Setaria italica
Seita.2G327300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41484376-41484875 Setaria italica
Seita.2G327300 1.0kb upstream 1.0kb upstream 2826 true scaffold_2: 41481550-41484375 Setaria italica
Seita.2G327300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41481550-41482549 Setaria italica
Seita.2G327300 1.0kb downstream 1.0kb downstream 2826 true scaffold_2: 41482550-41485375 Setaria italica
Seita.2G327300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41484376-41485375 Setaria italica
Seita.2G327300 2.0kb upstream 2.0kb upstream 3826 true scaffold_2: 41480550-41484375 Setaria italica
Seita.2G327300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41480550-41482549 Setaria italica
Seita.2G327300 2.0kb downstream 2.0kb downstream 3826 true scaffold_2: 41482550-41486375 Setaria italica
Seita.2G327300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41484376-41486375 Setaria italica
Seita.2G327300 5.0kb upstream 5.0kb upstream 6826 true scaffold_2: 41477550-41484375 Setaria italica
Seita.2G327300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41477550-41482549 Setaria italica
Seita.2G327300 5.0kb downstream 5.0kb downstream 6826 true scaffold_2: 41482550-41489375 Setaria italica
Seita.2G327300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41484376-41489375 Setaria italica
Seita.2G327300 10.0kb upstream 10.0kb upstream 11826 true scaffold_2: 41472550-41484375 Setaria italica
Seita.2G327300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41472550-41482549 Setaria italica
Seita.2G327300 10.0kb downstream 10.0kb downstream 11826 true scaffold_2: 41482550-41494375 Setaria italica
Seita.2G327300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41484376-41494375 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179939 5267 Panicoideae View MSA
124578915 5269 Grass View MSA
122047776 5273 Angiosperm View MSA
121351235 5274 Embryophyte View MSA
123426456 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.429        
cufflinks 0.64        
cufflinks 0.081       Low
cufflinks 0.069     Low Low
cufflinks 0.031     Low Low
cufflinks 0.52        
cufflinks 0.287        
cufflinks 0.316        
cufflinks 0.336        
cufflinks 1.096       High
cufflinks 0.488        
cufflinks 0.39        
cufflinks 0.329        
cufflinks 0.502        
cufflinks 0.511        
cufflinks 0.601        
cufflinks 0.661        
cufflinks 0.651        
cufflinks 0.036     Low Low
cufflinks 0.508        

0 Strain