Gene : Seita.2G331100 S. italica v2.2
Defline:  (1 of 1) PTHR24349:SF23 - MAP KINASE-ACTIVATED PROTEIN KINASE 5 Genomic Order:  3311
Name:  ? Seita.2G331100 Secondary Identifier:  ? PAC:32718405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G331100 0.5kb upstream 0.5kb upstream 5038 true scaffold_2: 41740491-41745528 Setaria italica
Seita.2G331100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41745029-41745528 Setaria italica
Seita.2G331100 0.5kb downstream 0.5kb downstream 5038 true scaffold_2: 41739991-41745028 Setaria italica
Seita.2G331100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41739991-41740490 Setaria italica
Seita.2G331100 1.0kb upstream 1.0kb upstream 5538 true scaffold_2: 41740491-41746028 Setaria italica
Seita.2G331100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41745029-41746028 Setaria italica
Seita.2G331100 1.0kb downstream 1.0kb downstream 5538 true scaffold_2: 41739491-41745028 Setaria italica
Seita.2G331100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41739491-41740490 Setaria italica
Seita.2G331100 2.0kb upstream 2.0kb upstream 6538 true scaffold_2: 41740491-41747028 Setaria italica
Seita.2G331100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41745029-41747028 Setaria italica
Seita.2G331100 2.0kb downstream 2.0kb downstream 6538 true scaffold_2: 41738491-41745028 Setaria italica
Seita.2G331100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41738491-41740490 Setaria italica
Seita.2G331100 5.0kb upstream 5.0kb upstream 9538 true scaffold_2: 41740491-41750028 Setaria italica
Seita.2G331100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41745029-41750028 Setaria italica
Seita.2G331100 5.0kb downstream 5.0kb downstream 9538 true scaffold_2: 41735491-41745028 Setaria italica
Seita.2G331100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41735491-41740490 Setaria italica
Seita.2G331100 10.0kb upstream 10.0kb upstream 14538 true scaffold_2: 41740491-41755028 Setaria italica
Seita.2G331100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41745029-41755028 Setaria italica
Seita.2G331100 10.0kb downstream 10.0kb downstream 14538 true scaffold_2: 41730491-41745028 Setaria italica
Seita.2G331100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41730491-41740490 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190978 5267 Panicoideae View MSA
124578780 5269 Grass View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.087     High  
cufflinks 38.342     High  
cufflinks 40.351     High  
cufflinks 33.319     High  
cufflinks 36.912     High  
cufflinks 44.512     High High
cufflinks 28.039     High  
cufflinks 29.137     High  
cufflinks 46.888     High High
cufflinks 17.276     High Low
cufflinks 36.723     High  
cufflinks 39.054     High  
cufflinks 38.342     High  
cufflinks 36.71     High  
cufflinks 38.352     High  
cufflinks 20.685     High Low
cufflinks 40.757     High  
cufflinks 19.34     High Low
cufflinks 21.572     High Low
cufflinks 38.633     High  

0 Strain