Gene : Seita.2G338300 S. italica v2.2
Genomic Order:  3383 Name:  ? Seita.2G338300
Secondary Identifier:  ? PAC:32720772
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G338300 0.5kb upstream 0.5kb upstream 1052 true scaffold_2: 42209250-42210301 Setaria italica
Seita.2G338300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42209802-42210301 Setaria italica
Seita.2G338300 0.5kb downstream 0.5kb downstream 1052 true scaffold_2: 42208750-42209801 Setaria italica
Seita.2G338300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42208750-42209249 Setaria italica
Seita.2G338300 1.0kb upstream 1.0kb upstream 1552 true scaffold_2: 42209250-42210801 Setaria italica
Seita.2G338300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42209802-42210801 Setaria italica
Seita.2G338300 1.0kb downstream 1.0kb downstream 1552 true scaffold_2: 42208250-42209801 Setaria italica
Seita.2G338300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42208250-42209249 Setaria italica
Seita.2G338300 2.0kb upstream 2.0kb upstream 2552 true scaffold_2: 42209250-42211801 Setaria italica
Seita.2G338300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42209802-42211801 Setaria italica
Seita.2G338300 2.0kb downstream 2.0kb downstream 2552 true scaffold_2: 42207250-42209801 Setaria italica
Seita.2G338300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42207250-42209249 Setaria italica
Seita.2G338300 5.0kb upstream 5.0kb upstream 5552 true scaffold_2: 42209250-42214801 Setaria italica
Seita.2G338300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42209802-42214801 Setaria italica
Seita.2G338300 5.0kb downstream 5.0kb downstream 5552 true scaffold_2: 42204250-42209801 Setaria italica
Seita.2G338300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42204250-42209249 Setaria italica
Seita.2G338300 10.0kb upstream 10.0kb upstream 10552 true scaffold_2: 42209250-42219801 Setaria italica
Seita.2G338300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42209802-42219801 Setaria italica
Seita.2G338300 10.0kb downstream 10.0kb downstream 10552 true scaffold_2: 42199250-42209801 Setaria italica
Seita.2G338300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42199250-42209249 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121804435 5273 Angiosperm View MSA
122065294 5267 Panicoideae View MSA
124364576 5269 Grass View MSA
121075575 5274 Embryophyte View MSA
123115198 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain