Gene : Seita.2G345400 S. italica v2.2
Genomic Order:  3454 Name:  ? Seita.2G345400
Secondary Identifier:  ? PAC:32723409
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G345400 0.5kb upstream 0.5kb upstream 931 true scaffold_2: 42688590-42689520 Setaria italica
Seita.2G345400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42689021-42689520 Setaria italica
Seita.2G345400 0.5kb downstream 0.5kb downstream 931 true scaffold_2: 42688090-42689020 Setaria italica
Seita.2G345400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42688090-42688589 Setaria italica
Seita.2G345400 1.0kb upstream 1.0kb upstream 1431 true scaffold_2: 42688590-42690020 Setaria italica
Seita.2G345400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42689021-42690020 Setaria italica
Seita.2G345400 1.0kb downstream 1.0kb downstream 1431 true scaffold_2: 42687590-42689020 Setaria italica
Seita.2G345400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42687590-42688589 Setaria italica
Seita.2G345400 2.0kb upstream 2.0kb upstream 2431 true scaffold_2: 42688590-42691020 Setaria italica
Seita.2G345400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42689021-42691020 Setaria italica
Seita.2G345400 2.0kb downstream 2.0kb downstream 2431 true scaffold_2: 42686590-42689020 Setaria italica
Seita.2G345400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42686590-42688589 Setaria italica
Seita.2G345400 5.0kb upstream 5.0kb upstream 5431 true scaffold_2: 42688590-42694020 Setaria italica
Seita.2G345400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42689021-42694020 Setaria italica
Seita.2G345400 5.0kb downstream 5.0kb downstream 5431 true scaffold_2: 42683590-42689020 Setaria italica
Seita.2G345400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42683590-42688589 Setaria italica
Seita.2G345400 10.0kb upstream 10.0kb upstream 10431 true scaffold_2: 42688590-42699020 Setaria italica
Seita.2G345400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42689021-42699020 Setaria italica
Seita.2G345400 10.0kb downstream 10.0kb downstream 10431 true scaffold_2: 42678590-42689020 Setaria italica
Seita.2G345400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42678590-42688589 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181775 5267 Panicoideae View MSA
124579555 5269 Grass View MSA
122048705 5273 Angiosperm View MSA
121347737 5274 Embryophyte View MSA
123380610 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain