Gene : Seita.2G353000 S. italica v2.2
Defline:  (1 of 1) PTHR13140//PTHR13140:SF439 - MYOSIN Genomic Order:  3530
Name:  ? Seita.2G353000 Secondary Identifier:  ? PAC:32721826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G353000 0.5kb upstream 0.5kb upstream 10451 true scaffold_2: 43276748-43287198 Setaria italica
Seita.2G353000 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 43286699-43287198 Setaria italica
Seita.2G353000 0.5kb downstream 0.5kb downstream 10451 true scaffold_2: 43276248-43286698 Setaria italica
Seita.2G353000 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 43276248-43276747 Setaria italica
Seita.2G353000 1.0kb upstream 1.0kb upstream 10951 true scaffold_2: 43276748-43287698 Setaria italica
Seita.2G353000 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 43286699-43287698 Setaria italica
Seita.2G353000 1.0kb downstream 1.0kb downstream 10951 true scaffold_2: 43275748-43286698 Setaria italica
Seita.2G353000 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 43275748-43276747 Setaria italica
Seita.2G353000 2.0kb upstream 2.0kb upstream 11951 true scaffold_2: 43276748-43288698 Setaria italica
Seita.2G353000 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 43286699-43288698 Setaria italica
Seita.2G353000 2.0kb downstream 2.0kb downstream 11951 true scaffold_2: 43274748-43286698 Setaria italica
Seita.2G353000 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 43274748-43276747 Setaria italica
Seita.2G353000 5.0kb upstream 5.0kb upstream 14951 true scaffold_2: 43276748-43291698 Setaria italica
Seita.2G353000 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 43286699-43291698 Setaria italica
Seita.2G353000 5.0kb downstream 5.0kb downstream 14951 true scaffold_2: 43271748-43286698 Setaria italica
Seita.2G353000 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 43271748-43276747 Setaria italica
Seita.2G353000 10.0kb upstream 10.0kb upstream 19951 true scaffold_2: 43276748-43296698 Setaria italica
Seita.2G353000 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 43286699-43296698 Setaria italica
Seita.2G353000 10.0kb downstream 10.0kb downstream 19951 true scaffold_2: 43266748-43286698 Setaria italica
Seita.2G353000 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 43266748-43276747 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177894 5267 Panicoideae View MSA
124583774 5269 Grass View MSA
122049151 5273 Angiosperm View MSA
121347922 5274 Embryophyte View MSA
123426444 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.475     High  
cufflinks 31.658     High High
cufflinks 35.035     High High
cufflinks 26.178     High  
cufflinks 20.712     High  
cufflinks 32.315     High High
cufflinks 26.843     High  
cufflinks 15.152     High  
cufflinks 17.859     High  
cufflinks 7.433       Low
cufflinks 17.502     High  
cufflinks 13.538        
cufflinks 16.647     High  
cufflinks 23.961     High  
cufflinks 16.508     High  
cufflinks 37.651     High High
cufflinks 11.593       Low
cufflinks 16.024     High  
cufflinks 22.748     High  
cufflinks 13.416        

0 Strain