Gene : Seita.2G440500 S. italica v2.2
Defline:  (1 of 1) KOG0583//KOG0598 - Serine/threonine protein kinase // Ribosomal protein S6 kinase and related proteins Genomic Order:  4405
Name:  ? Seita.2G440500 Secondary Identifier:  ? PAC:32719310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G440500 0.5kb upstream 0.5kb upstream 11533 true scaffold_2: 48912371-48923903 Setaria italica
Seita.2G440500 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 48923404-48923903 Setaria italica
Seita.2G440500 0.5kb downstream 0.5kb downstream 11533 true scaffold_2: 48911871-48923403 Setaria italica
Seita.2G440500 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 48911871-48912370 Setaria italica
Seita.2G440500 1.0kb upstream 1.0kb upstream 12033 true scaffold_2: 48912371-48924403 Setaria italica
Seita.2G440500 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 48923404-48924403 Setaria italica
Seita.2G440500 1.0kb downstream 1.0kb downstream 12033 true scaffold_2: 48911371-48923403 Setaria italica
Seita.2G440500 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 48911371-48912370 Setaria italica
Seita.2G440500 2.0kb upstream 2.0kb upstream 13033 true scaffold_2: 48912371-48925403 Setaria italica
Seita.2G440500 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 48923404-48925403 Setaria italica
Seita.2G440500 2.0kb downstream 2.0kb downstream 13033 true scaffold_2: 48910371-48923403 Setaria italica
Seita.2G440500 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 48910371-48912370 Setaria italica
Seita.2G440500 5.0kb upstream 5.0kb upstream 16033 true scaffold_2: 48912371-48928403 Setaria italica
Seita.2G440500 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 48923404-48928403 Setaria italica
Seita.2G440500 5.0kb downstream 5.0kb downstream 16033 true scaffold_2: 48907371-48923403 Setaria italica
Seita.2G440500 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 48907371-48912370 Setaria italica
Seita.2G440500 10.0kb upstream 10.0kb upstream 21033 true scaffold_2: 48912371-48933403 Setaria italica
Seita.2G440500 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 48923404-48933403 Setaria italica
Seita.2G440500 10.0kb downstream 10.0kb downstream 21033 true scaffold_2: 48902371-48923403 Setaria italica
Seita.2G440500 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 48902371-48912370 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040979 5273 Angiosperm View MSA
122189369 5267 Panicoideae View MSA
124575409 5269 Grass View MSA
121345402 5274 Embryophyte View MSA
123428287 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.174        
cufflinks 1.488        
cufflinks 0.216       Low
cufflinks 0.181       Low
cufflinks 0.104       Low
cufflinks 1.252        
cufflinks 0.802        
cufflinks 1.023        
cufflinks 0.536        
cufflinks 1.525        
cufflinks 2.32       High
cufflinks 1.472        
cufflinks 0.98        
cufflinks 0.224       Low
cufflinks 2.032       High
cufflinks 0.249        
cufflinks 1.511        
cufflinks 0.311        
cufflinks 0.134       Low
cufflinks 1.858       High

0 Strain