Gene : Seita.2G444500 S. italica v2.2
Defline:  (1 of 1) PTHR11260//PTHR11260:SF222 - GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING Genomic Order:  4445
Name:  ? Seita.2G444500 Secondary Identifier:  ? PAC:32722249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G444500 0.5kb upstream 0.5kb upstream 2395 true scaffold_2: 49139884-49142278 Setaria italica
Seita.2G444500 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 49139884-49140383 Setaria italica
Seita.2G444500 0.5kb downstream 0.5kb downstream 2395 true scaffold_2: 49140384-49142778 Setaria italica
Seita.2G444500 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 49142279-49142778 Setaria italica
Seita.2G444500 1.0kb upstream 1.0kb upstream 2895 true scaffold_2: 49139384-49142278 Setaria italica
Seita.2G444500 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 49139384-49140383 Setaria italica
Seita.2G444500 1.0kb downstream 1.0kb downstream 2895 true scaffold_2: 49140384-49143278 Setaria italica
Seita.2G444500 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 49142279-49143278 Setaria italica
Seita.2G444500 2.0kb upstream 2.0kb upstream 3895 true scaffold_2: 49138384-49142278 Setaria italica
Seita.2G444500 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 49138384-49140383 Setaria italica
Seita.2G444500 2.0kb downstream 2.0kb downstream 3895 true scaffold_2: 49140384-49144278 Setaria italica
Seita.2G444500 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 49142279-49144278 Setaria italica
Seita.2G444500 5.0kb upstream 5.0kb upstream 6895 true scaffold_2: 49135384-49142278 Setaria italica
Seita.2G444500 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 49135384-49140383 Setaria italica
Seita.2G444500 5.0kb downstream 5.0kb downstream 6895 true scaffold_2: 49140384-49147278 Setaria italica
Seita.2G444500 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 49142279-49147278 Setaria italica
Seita.2G444500 10.0kb upstream 10.0kb upstream 11895 true scaffold_2: 49130384-49142278 Setaria italica
Seita.2G444500 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 49130384-49140383 Setaria italica
Seita.2G444500 10.0kb downstream 10.0kb downstream 11895 true scaffold_2: 49140384-49152278 Setaria italica
Seita.2G444500 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 49142279-49152278 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121894082 5273 Angiosperm View MSA
122176005 5267 Panicoideae View MSA
124465359 5269 Grass View MSA
123429086 5275 Viridiplantae View MSA
121164669 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 192.197     High High
cufflinks 130.006     High  
cufflinks 0.197       Low
cufflinks 0.332       Low
cufflinks 3.736        
cufflinks 126.147     High  
cufflinks 42.272     High  
cufflinks 44.347     High  
cufflinks 37.502     High  
cufflinks 190.861     High High
cufflinks 261.837     High High
cufflinks 8.51        
cufflinks 125.185     High  
cufflinks 0.098     Low Low
cufflinks 54.568     High  
cufflinks 24.924     High  
cufflinks 22.653     High  
cufflinks 17.784     High  
cufflinks 0.349       Low
cufflinks 20.905     High  

0 Strain