Gene : Seita.2G444900 S. italica v2.2
Defline:  (1 of 1) PTHR21717//PTHR21717:SF32 - TELOMERIC REPEAT BINDING PROTEIN Genomic Order:  4449
Name:  ? Seita.2G444900 Secondary Identifier:  ? PAC:32723213
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G444900 0.5kb upstream 0.5kb upstream 2682 true scaffold_2: 49159275-49161956 Setaria italica
Seita.2G444900 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 49161457-49161956 Setaria italica
Seita.2G444900 0.5kb downstream 0.5kb downstream 2682 true scaffold_2: 49158775-49161456 Setaria italica
Seita.2G444900 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 49158775-49159274 Setaria italica
Seita.2G444900 1.0kb upstream 1.0kb upstream 3182 true scaffold_2: 49159275-49162456 Setaria italica
Seita.2G444900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 49161457-49162456 Setaria italica
Seita.2G444900 1.0kb downstream 1.0kb downstream 3182 true scaffold_2: 49158275-49161456 Setaria italica
Seita.2G444900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 49158275-49159274 Setaria italica
Seita.2G444900 2.0kb upstream 2.0kb upstream 4182 true scaffold_2: 49159275-49163456 Setaria italica
Seita.2G444900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 49161457-49163456 Setaria italica
Seita.2G444900 2.0kb downstream 2.0kb downstream 4182 true scaffold_2: 49157275-49161456 Setaria italica
Seita.2G444900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 49157275-49159274 Setaria italica
Seita.2G444900 5.0kb upstream 5.0kb upstream 7182 true scaffold_2: 49159275-49166456 Setaria italica
Seita.2G444900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 49161457-49166456 Setaria italica
Seita.2G444900 5.0kb downstream 5.0kb downstream 7182 true scaffold_2: 49154275-49161456 Setaria italica
Seita.2G444900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 49154275-49159274 Setaria italica
Seita.2G444900 10.0kb upstream 10.0kb upstream 12182 true scaffold_2: 49159275-49171456 Setaria italica
Seita.2G444900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 49161457-49171456 Setaria italica
Seita.2G444900 10.0kb downstream 10.0kb downstream 12182 true scaffold_2: 49149275-49161456 Setaria italica
Seita.2G444900 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 49149275-49159274 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196111 5267 Panicoideae View MSA
124571588 5269 Grass View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.837        
cufflinks 1.217       High
cufflinks 0.793        
cufflinks 0.581        
cufflinks 0.545       Low
cufflinks 1.424       High
cufflinks 0.655        
cufflinks 0.877        
cufflinks 0.549       Low
cufflinks 1.009        
cufflinks 0.778        
cufflinks 0.91        
cufflinks 0.651        
cufflinks 0.965        
cufflinks 0.927        
cufflinks 0.638        
cufflinks 1.365       High
cufflinks 0.706        
cufflinks 0.411       Low
cufflinks 0.916        

0 Strain