Gene : Seita.3G004300 S. italica v2.2
Defline:  (1 of 63) PF00892 - EamA-like transporter family (EamA) Genomic Order:  43
Name:  ? Seita.3G004300 Secondary Identifier:  ? PAC:32710072
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G004300 0.5kb upstream 0.5kb upstream 3561 true scaffold_3: 205924-209484 Setaria italica
Seita.3G004300 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 205924-206423 Setaria italica
Seita.3G004300 0.5kb downstream 0.5kb downstream 3561 true scaffold_3: 206424-209984 Setaria italica
Seita.3G004300 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 209485-209984 Setaria italica
Seita.3G004300 1.0kb upstream 1.0kb upstream 4061 true scaffold_3: 205424-209484 Setaria italica
Seita.3G004300 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 205424-206423 Setaria italica
Seita.3G004300 1.0kb downstream 1.0kb downstream 4061 true scaffold_3: 206424-210484 Setaria italica
Seita.3G004300 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 209485-210484 Setaria italica
Seita.3G004300 2.0kb upstream 2.0kb upstream 5061 true scaffold_3: 204424-209484 Setaria italica
Seita.3G004300 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 204424-206423 Setaria italica
Seita.3G004300 2.0kb downstream 2.0kb downstream 5061 true scaffold_3: 206424-211484 Setaria italica
Seita.3G004300 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 209485-211484 Setaria italica
Seita.3G004300 5.0kb upstream 5.0kb upstream 8061 true scaffold_3: 201424-209484 Setaria italica
Seita.3G004300 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 201424-206423 Setaria italica
Seita.3G004300 5.0kb downstream 5.0kb downstream 8061 true scaffold_3: 206424-214484 Setaria italica
Seita.3G004300 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 209485-214484 Setaria italica
Seita.3G004300 10.0kb upstream 10.0kb upstream 13061 true scaffold_3: 196424-209484 Setaria italica
Seita.3G004300 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 196424-206423 Setaria italica
Seita.3G004300 10.0kb downstream 10.0kb downstream 13061 true scaffold_3: 206424-219484 Setaria italica
Seita.3G004300 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 209485-219484 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026670 5273 Angiosperm View MSA
122198581 5267 Panicoideae View MSA
124586908 5269 Grass View MSA
121296466 5274 Embryophyte View MSA
123334621 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.158       High
cufflinks 0.024     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain