Gene : Seita.3G010700 S. italica v2.2
Defline:  (1 of 1) PF02137 - Adenosine-deaminase (editase) domain (A_deamin) Genomic Order:  107
Name:  ? Seita.3G010700 Secondary Identifier:  ? PAC:32710203
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G010700 0.5kb upstream 0.5kb upstream 3656 true scaffold_3: 576740-580395 Setaria italica
Seita.3G010700 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 579896-580395 Setaria italica
Seita.3G010700 0.5kb downstream 0.5kb downstream 3656 true scaffold_3: 576240-579895 Setaria italica
Seita.3G010700 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 576240-576739 Setaria italica
Seita.3G010700 1.0kb upstream 1.0kb upstream 4156 true scaffold_3: 576740-580895 Setaria italica
Seita.3G010700 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 579896-580895 Setaria italica
Seita.3G010700 1.0kb downstream 1.0kb downstream 4156 true scaffold_3: 575740-579895 Setaria italica
Seita.3G010700 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 575740-576739 Setaria italica
Seita.3G010700 2.0kb upstream 2.0kb upstream 5156 true scaffold_3: 576740-581895 Setaria italica
Seita.3G010700 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 579896-581895 Setaria italica
Seita.3G010700 2.0kb downstream 2.0kb downstream 5156 true scaffold_3: 574740-579895 Setaria italica
Seita.3G010700 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 574740-576739 Setaria italica
Seita.3G010700 5.0kb upstream 5.0kb upstream 8156 true scaffold_3: 576740-584895 Setaria italica
Seita.3G010700 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 579896-584895 Setaria italica
Seita.3G010700 5.0kb downstream 5.0kb downstream 8156 true scaffold_3: 571740-579895 Setaria italica
Seita.3G010700 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 571740-576739 Setaria italica
Seita.3G010700 10.0kb upstream 10.0kb upstream 13156 true scaffold_3: 576740-589895 Setaria italica
Seita.3G010700 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 579896-589895 Setaria italica
Seita.3G010700 10.0kb downstream 10.0kb downstream 13156 true scaffold_3: 566740-579895 Setaria italica
Seita.3G010700 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 566740-576739 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188439 5267 Panicoideae View MSA
124575419 5269 Grass View MSA
122043164 5273 Angiosperm View MSA
121346845 5274 Embryophyte View MSA
123424595 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.322        
cufflinks 2.503        
cufflinks 3.101        
cufflinks 2.461        
cufflinks 2.728        
cufflinks 2.497        
cufflinks 3.06        
cufflinks 4.016       High
cufflinks 2.714        
cufflinks 1.709       Low
cufflinks 2.331        
cufflinks 1.906       Low
cufflinks 1.731       Low
cufflinks 5.682       High
cufflinks 2.501        
cufflinks 2.883        
cufflinks 3.333        
cufflinks 2.628        
cufflinks 2.461        
cufflinks 2.901        

0 Strain