Gene : Seita.3G014100 S. italica v2.2
Defline:  (1 of 1) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE Genomic Order:  141
Name:  ? Seita.3G014100 Secondary Identifier:  ? PAC:32712756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G014100 0.5kb upstream 0.5kb upstream 1750 true scaffold_3: 754088-755837 Setaria italica
Seita.3G014100 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 754088-754587 Setaria italica
Seita.3G014100 0.5kb downstream 0.5kb downstream 1750 true scaffold_3: 754588-756337 Setaria italica
Seita.3G014100 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 755838-756337 Setaria italica
Seita.3G014100 1.0kb upstream 1.0kb upstream 2250 true scaffold_3: 753588-755837 Setaria italica
Seita.3G014100 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 753588-754587 Setaria italica
Seita.3G014100 1.0kb downstream 1.0kb downstream 2250 true scaffold_3: 754588-756837 Setaria italica
Seita.3G014100 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 755838-756837 Setaria italica
Seita.3G014100 2.0kb upstream 2.0kb upstream 3250 true scaffold_3: 752588-755837 Setaria italica
Seita.3G014100 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 752588-754587 Setaria italica
Seita.3G014100 2.0kb downstream 2.0kb downstream 3250 true scaffold_3: 754588-757837 Setaria italica
Seita.3G014100 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 755838-757837 Setaria italica
Seita.3G014100 5.0kb upstream 5.0kb upstream 6250 true scaffold_3: 749588-755837 Setaria italica
Seita.3G014100 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 749588-754587 Setaria italica
Seita.3G014100 5.0kb downstream 5.0kb downstream 6250 true scaffold_3: 754588-760837 Setaria italica
Seita.3G014100 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 755838-760837 Setaria italica
Seita.3G014100 10.0kb upstream 10.0kb upstream 11250 true scaffold_3: 744588-755837 Setaria italica
Seita.3G014100 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 744588-754587 Setaria italica
Seita.3G014100 10.0kb downstream 10.0kb downstream 11250 true scaffold_3: 754588-765837 Setaria italica
Seita.3G014100 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 755838-765837 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190615 5267 Panicoideae View MSA
124572860 5269 Grass View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 234.811     High  
cufflinks 17.924     High Low
cufflinks 552.266     High  
cufflinks 1130.352     High  
cufflinks 845.844     High  
cufflinks 35.739     High Low
cufflinks 205.325     High  
cufflinks 771.818     High  
cufflinks 508.461     High  
cufflinks 762.674     High  
cufflinks 184.163     High  
cufflinks 1244.836     High High
cufflinks 681.954     High  
cufflinks 310.557     High  
cufflinks 68.678     High Low
cufflinks 591.255     High  
cufflinks 561.099     High  
cufflinks 1439.681     High High
cufflinks 505.887     High  
cufflinks 290.427     High  

0 Strain