Gene : Seita.2G414400 S. italica v2.2
Genomic Order:  4144 Name:  ? Seita.2G414400
Secondary Identifier:  ? PAC:32719584
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G414400 0.5kb upstream 0.5kb upstream 2004 true scaffold_2: 47129801-47131804 Setaria italica
Seita.2G414400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 47131305-47131804 Setaria italica
Seita.2G414400 0.5kb downstream 0.5kb downstream 2004 true scaffold_2: 47129301-47131304 Setaria italica
Seita.2G414400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 47129301-47129800 Setaria italica
Seita.2G414400 1.0kb upstream 1.0kb upstream 2504 true scaffold_2: 47129801-47132304 Setaria italica
Seita.2G414400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 47131305-47132304 Setaria italica
Seita.2G414400 1.0kb downstream 1.0kb downstream 2504 true scaffold_2: 47128801-47131304 Setaria italica
Seita.2G414400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 47128801-47129800 Setaria italica
Seita.2G414400 2.0kb upstream 2.0kb upstream 3504 true scaffold_2: 47129801-47133304 Setaria italica
Seita.2G414400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 47131305-47133304 Setaria italica
Seita.2G414400 2.0kb downstream 2.0kb downstream 3504 true scaffold_2: 47127801-47131304 Setaria italica
Seita.2G414400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 47127801-47129800 Setaria italica
Seita.2G414400 5.0kb upstream 5.0kb upstream 6504 true scaffold_2: 47129801-47136304 Setaria italica
Seita.2G414400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 47131305-47136304 Setaria italica
Seita.2G414400 5.0kb downstream 5.0kb downstream 6504 true scaffold_2: 47124801-47131304 Setaria italica
Seita.2G414400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 47124801-47129800 Setaria italica
Seita.2G414400 10.0kb upstream 10.0kb upstream 11504 true scaffold_2: 47129801-47141304 Setaria italica
Seita.2G414400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 47131305-47141304 Setaria italica
Seita.2G414400 10.0kb downstream 10.0kb downstream 11504 true scaffold_2: 47119801-47131304 Setaria italica
Seita.2G414400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 47119801-47129800 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195365 5267 Panicoideae View MSA
124585602 5269 Grass View MSA
122048753 5273 Angiosperm View MSA
121311096 5274 Embryophyte View MSA
123348442 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 43.308     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.89       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.184        
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.068     Low  

0 Strain