Gene : Seita.2G418800 S. italica v2.2
Defline:  (1 of 1) PTHR14241:SF10 - VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN DDB_G0292188 Genomic Order:  4188
Name:  ? Seita.2G418800 Secondary Identifier:  ? PAC:32721216
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G418800 0.5kb upstream 0.5kb upstream 3981 true scaffold_2: 47410765-47414745 Setaria italica
Seita.2G418800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 47414246-47414745 Setaria italica
Seita.2G418800 0.5kb downstream 0.5kb downstream 3981 true scaffold_2: 47410265-47414245 Setaria italica
Seita.2G418800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 47410265-47410764 Setaria italica
Seita.2G418800 1.0kb upstream 1.0kb upstream 4481 true scaffold_2: 47410765-47415245 Setaria italica
Seita.2G418800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 47414246-47415245 Setaria italica
Seita.2G418800 1.0kb downstream 1.0kb downstream 4481 true scaffold_2: 47409765-47414245 Setaria italica
Seita.2G418800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 47409765-47410764 Setaria italica
Seita.2G418800 2.0kb upstream 2.0kb upstream 5481 true scaffold_2: 47410765-47416245 Setaria italica
Seita.2G418800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 47414246-47416245 Setaria italica
Seita.2G418800 2.0kb downstream 2.0kb downstream 5481 true scaffold_2: 47408765-47414245 Setaria italica
Seita.2G418800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 47408765-47410764 Setaria italica
Seita.2G418800 5.0kb upstream 5.0kb upstream 8481 true scaffold_2: 47410765-47419245 Setaria italica
Seita.2G418800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 47414246-47419245 Setaria italica
Seita.2G418800 5.0kb downstream 5.0kb downstream 8481 true scaffold_2: 47405765-47414245 Setaria italica
Seita.2G418800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 47405765-47410764 Setaria italica
Seita.2G418800 10.0kb upstream 10.0kb upstream 13481 true scaffold_2: 47410765-47424245 Setaria italica
Seita.2G418800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 47414246-47424245 Setaria italica
Seita.2G418800 10.0kb downstream 10.0kb downstream 13481 true scaffold_2: 47400765-47414245 Setaria italica
Seita.2G418800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 47400765-47410764 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177703 5267 Panicoideae View MSA
124573949 5269 Grass View MSA
122049312 5273 Angiosperm View MSA
121347896 5274 Embryophyte View MSA
123380671 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.206        
cufflinks 2.285        
cufflinks 3.747        
cufflinks 3.921        
cufflinks 2.436        
cufflinks 2.58        
cufflinks 1.778       Low
cufflinks 1.609       Low
cufflinks 1.089       Low
cufflinks 2.921        
cufflinks 2.281        
cufflinks 5.514       High
cufflinks 4.228       High
cufflinks 3.981        
cufflinks 3.514        
cufflinks 2.393        
cufflinks 4.569       High
cufflinks 2.544        
cufflinks 3.894        
cufflinks 3.21        

0 Strain