Gene : Seita.2G425400 S. italica v2.2
Defline:  (1 of 42) PF04525 - LURP-one-related (LOR) Genomic Order:  4254
Name:  ? Seita.2G425400 Secondary Identifier:  ? PAC:32720025
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G425400 0.5kb upstream 0.5kb upstream 1241 true scaffold_2: 47795886-47797126 Setaria italica
Seita.2G425400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 47795886-47796385 Setaria italica
Seita.2G425400 0.5kb downstream 0.5kb downstream 1241 true scaffold_2: 47796386-47797626 Setaria italica
Seita.2G425400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 47797127-47797626 Setaria italica
Seita.2G425400 1.0kb upstream 1.0kb upstream 1741 true scaffold_2: 47795386-47797126 Setaria italica
Seita.2G425400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 47795386-47796385 Setaria italica
Seita.2G425400 1.0kb downstream 1.0kb downstream 1741 true scaffold_2: 47796386-47798126 Setaria italica
Seita.2G425400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 47797127-47798126 Setaria italica
Seita.2G425400 2.0kb upstream 2.0kb upstream 2741 true scaffold_2: 47794386-47797126 Setaria italica
Seita.2G425400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 47794386-47796385 Setaria italica
Seita.2G425400 2.0kb downstream 2.0kb downstream 2741 true scaffold_2: 47796386-47799126 Setaria italica
Seita.2G425400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 47797127-47799126 Setaria italica
Seita.2G425400 5.0kb upstream 5.0kb upstream 5741 true scaffold_2: 47791386-47797126 Setaria italica
Seita.2G425400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 47791386-47796385 Setaria italica
Seita.2G425400 5.0kb downstream 5.0kb downstream 5741 true scaffold_2: 47796386-47802126 Setaria italica
Seita.2G425400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 47797127-47802126 Setaria italica
Seita.2G425400 10.0kb upstream 10.0kb upstream 10741 true scaffold_2: 47786386-47797126 Setaria italica
Seita.2G425400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 47786386-47796385 Setaria italica
Seita.2G425400 10.0kb downstream 10.0kb downstream 10741 true scaffold_2: 47796386-47807126 Setaria italica
Seita.2G425400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 47797127-47807126 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188639 5267 Panicoideae View MSA
124584609 5269 Grass View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.166        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low Low

0 Strain