Gene : Seita.2G427600 S. italica v2.2
Defline:  (1 of 42) PF04525 - LURP-one-related (LOR) Genomic Order:  4276
Name:  ? Seita.2G427600 Secondary Identifier:  ? PAC:32719580
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G427600 0.5kb upstream 0.5kb upstream 1457 true scaffold_2: 47975437-47976893 Setaria italica
Seita.2G427600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 47976394-47976893 Setaria italica
Seita.2G427600 0.5kb downstream 0.5kb downstream 1457 true scaffold_2: 47974937-47976393 Setaria italica
Seita.2G427600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 47974937-47975436 Setaria italica
Seita.2G427600 1.0kb upstream 1.0kb upstream 1957 true scaffold_2: 47975437-47977393 Setaria italica
Seita.2G427600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 47976394-47977393 Setaria italica
Seita.2G427600 1.0kb downstream 1.0kb downstream 1957 true scaffold_2: 47974437-47976393 Setaria italica
Seita.2G427600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 47974437-47975436 Setaria italica
Seita.2G427600 2.0kb upstream 2.0kb upstream 2957 true scaffold_2: 47975437-47978393 Setaria italica
Seita.2G427600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 47976394-47978393 Setaria italica
Seita.2G427600 2.0kb downstream 2.0kb downstream 2957 true scaffold_2: 47973437-47976393 Setaria italica
Seita.2G427600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 47973437-47975436 Setaria italica
Seita.2G427600 5.0kb upstream 5.0kb upstream 5957 true scaffold_2: 47975437-47981393 Setaria italica
Seita.2G427600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 47976394-47981393 Setaria italica
Seita.2G427600 5.0kb downstream 5.0kb downstream 5957 true scaffold_2: 47970437-47976393 Setaria italica
Seita.2G427600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 47970437-47975436 Setaria italica
Seita.2G427600 10.0kb upstream 10.0kb upstream 10957 true scaffold_2: 47975437-47986393 Setaria italica
Seita.2G427600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 47976394-47986393 Setaria italica
Seita.2G427600 10.0kb downstream 10.0kb downstream 10957 true scaffold_2: 47965437-47976393 Setaria italica
Seita.2G427600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 47965437-47975436 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188639 5267 Panicoideae View MSA
124584609 5269 Grass View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.114     Low  
cufflinks 0.021     Low Low
cufflinks 0.359        
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.7       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.03       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.746        

0 Strain