Gene : Seita.3G074600 S. italica v2.2
Genomic Order:  746 Name:  ? Seita.3G074600
Secondary Identifier:  ? PAC:32713811
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G074600 0.5kb upstream 0.5kb upstream 1415 true scaffold_3: 4742840-4744254 Setaria italica
Seita.3G074600 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4743755-4744254 Setaria italica
Seita.3G074600 0.5kb downstream 0.5kb downstream 1415 true scaffold_3: 4742340-4743754 Setaria italica
Seita.3G074600 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4742340-4742839 Setaria italica
Seita.3G074600 1.0kb upstream 1.0kb upstream 1915 true scaffold_3: 4742840-4744754 Setaria italica
Seita.3G074600 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4743755-4744754 Setaria italica
Seita.3G074600 1.0kb downstream 1.0kb downstream 1915 true scaffold_3: 4741840-4743754 Setaria italica
Seita.3G074600 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4741840-4742839 Setaria italica
Seita.3G074600 2.0kb upstream 2.0kb upstream 2915 true scaffold_3: 4742840-4745754 Setaria italica
Seita.3G074600 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4743755-4745754 Setaria italica
Seita.3G074600 2.0kb downstream 2.0kb downstream 2915 true scaffold_3: 4740840-4743754 Setaria italica
Seita.3G074600 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4740840-4742839 Setaria italica
Seita.3G074600 5.0kb upstream 5.0kb upstream 5915 true scaffold_3: 4742840-4748754 Setaria italica
Seita.3G074600 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4743755-4748754 Setaria italica
Seita.3G074600 5.0kb downstream 5.0kb downstream 5915 true scaffold_3: 4737840-4743754 Setaria italica
Seita.3G074600 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4737840-4742839 Setaria italica
Seita.3G074600 10.0kb upstream 10.0kb upstream 10915 true scaffold_3: 4742840-4753754 Setaria italica
Seita.3G074600 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4743755-4753754 Setaria italica
Seita.3G074600 10.0kb downstream 10.0kb downstream 10915 true scaffold_3: 4732840-4743754 Setaria italica
Seita.3G074600 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4732840-4742839 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996168 5273 Angiosperm View MSA
122116962 5267 Panicoideae View MSA
124590829 5269 Grass View MSA
121266336 5274 Embryophyte View MSA
123304678 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.126     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.146        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112     Low  
cufflinks 0.213        
cufflinks 0.696       High
cufflinks 0.394       High
cufflinks 0.085     Low  
cufflinks 0.055     Low  
cufflinks 0.179        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.122        
cufflinks 0.021     Low Low
cufflinks 0.018     Low Low

0 Strain