Gene : Seita.3G033700 S. italica v2.2
Defline:  (1 of 1) PTHR19384//PTHR19384:SF79 - FLAVODOXIN-RELATED Genomic Order:  337
Name:  ? Seita.3G033700 Secondary Identifier:  ? PAC:32712867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G033700 0.5kb upstream 0.5kb upstream 7643 true scaffold_3: 2033012-2040654 Setaria italica
Seita.3G033700 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2040155-2040654 Setaria italica
Seita.3G033700 0.5kb downstream 0.5kb downstream 7643 true scaffold_3: 2032512-2040154 Setaria italica
Seita.3G033700 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2032512-2033011 Setaria italica
Seita.3G033700 1.0kb upstream 1.0kb upstream 8143 true scaffold_3: 2033012-2041154 Setaria italica
Seita.3G033700 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2040155-2041154 Setaria italica
Seita.3G033700 1.0kb downstream 1.0kb downstream 8143 true scaffold_3: 2032012-2040154 Setaria italica
Seita.3G033700 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2032012-2033011 Setaria italica
Seita.3G033700 2.0kb upstream 2.0kb upstream 9143 true scaffold_3: 2033012-2042154 Setaria italica
Seita.3G033700 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2040155-2042154 Setaria italica
Seita.3G033700 2.0kb downstream 2.0kb downstream 9143 true scaffold_3: 2031012-2040154 Setaria italica
Seita.3G033700 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2031012-2033011 Setaria italica
Seita.3G033700 5.0kb upstream 5.0kb upstream 12143 true scaffold_3: 2033012-2045154 Setaria italica
Seita.3G033700 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2040155-2045154 Setaria italica
Seita.3G033700 5.0kb downstream 5.0kb downstream 12143 true scaffold_3: 2028012-2040154 Setaria italica
Seita.3G033700 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2028012-2033011 Setaria italica
Seita.3G033700 10.0kb upstream 10.0kb upstream 17143 true scaffold_3: 2033012-2050154 Setaria italica
Seita.3G033700 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2040155-2050154 Setaria italica
Seita.3G033700 10.0kb downstream 10.0kb downstream 17143 true scaffold_3: 2023012-2040154 Setaria italica
Seita.3G033700 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2023012-2033011 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180374 5267 Panicoideae View MSA
124575165 5269 Grass View MSA
122046959 5273 Angiosperm View MSA
121344462 5274 Embryophyte View MSA
123424007 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.209     High High
cufflinks 53.937     High  
cufflinks 51.813     High  
cufflinks 49.801     High  
cufflinks 36.077     High Low
cufflinks 52.596     High  
cufflinks 41.361     High  
cufflinks 36.344     High Low
cufflinks 34.947     High Low
cufflinks 38.417     High Low
cufflinks 55.427     High  
cufflinks 53.276     High  
cufflinks 63.514     High High
cufflinks 42.599     High  
cufflinks 61.438     High High
cufflinks 38.619     High Low
cufflinks 49.671     High  
cufflinks 39.246     High  
cufflinks 43.042     High  
cufflinks 54.927     High  

0 Strain