Gene : Seita.3G036100 S. italica v2.2
Defline:  (1 of 1) PTHR19297//PTHR19297:SF103 - GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Genomic Order:  361
Name:  ? Seita.3G036100 Secondary Identifier:  ? PAC:32710251
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G036100 0.5kb upstream 0.5kb upstream 3828 true scaffold_3: 2185620-2189447 Setaria italica
Seita.3G036100 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2188948-2189447 Setaria italica
Seita.3G036100 0.5kb downstream 0.5kb downstream 3828 true scaffold_3: 2185120-2188947 Setaria italica
Seita.3G036100 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2185120-2185619 Setaria italica
Seita.3G036100 1.0kb upstream 1.0kb upstream 4328 true scaffold_3: 2185620-2189947 Setaria italica
Seita.3G036100 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2188948-2189947 Setaria italica
Seita.3G036100 1.0kb downstream 1.0kb downstream 4328 true scaffold_3: 2184620-2188947 Setaria italica
Seita.3G036100 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2184620-2185619 Setaria italica
Seita.3G036100 2.0kb upstream 2.0kb upstream 5328 true scaffold_3: 2185620-2190947 Setaria italica
Seita.3G036100 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2188948-2190947 Setaria italica
Seita.3G036100 2.0kb downstream 2.0kb downstream 5328 true scaffold_3: 2183620-2188947 Setaria italica
Seita.3G036100 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2183620-2185619 Setaria italica
Seita.3G036100 5.0kb upstream 5.0kb upstream 8328 true scaffold_3: 2185620-2193947 Setaria italica
Seita.3G036100 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2188948-2193947 Setaria italica
Seita.3G036100 5.0kb downstream 5.0kb downstream 8328 true scaffold_3: 2180620-2188947 Setaria italica
Seita.3G036100 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2180620-2185619 Setaria italica
Seita.3G036100 10.0kb upstream 10.0kb upstream 13328 true scaffold_3: 2185620-2198947 Setaria italica
Seita.3G036100 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2188948-2198947 Setaria italica
Seita.3G036100 10.0kb downstream 10.0kb downstream 13328 true scaffold_3: 2175620-2188947 Setaria italica
Seita.3G036100 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2175620-2185619 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186797 5267 Panicoideae View MSA
124569463 5269 Grass View MSA
122050409 5273 Angiosperm View MSA
121311894 5274 Embryophyte View MSA
123349128 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.648        
cufflinks 5.312       High
cufflinks 3.979        
cufflinks 3.85        
cufflinks 4.044        
cufflinks 4.862        
cufflinks 4.269        
cufflinks 3.674        
cufflinks 2.937        
cufflinks 3.757        
cufflinks 3.544        
cufflinks 2.717       Low
cufflinks 3.06        
cufflinks 3.893        
cufflinks 2.739       Low
cufflinks 7.954       High
cufflinks 2.186       Low
cufflinks 4.886        
cufflinks 4.837        
cufflinks 3.16        

0 Strain